RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ASAP3Q8TDY4 903 aa9.84□□□□□ -0.83
CPNE4-210ENST00000512332 C1orf54Q8WWF1 131 aa9.84□□□□□ -0.83
CPNE4-210ENST00000512332 ATXN2LQ8WWM7 1075 aaKnown RBP9.84□□□□□ -0.83
CPNE4-210ENST00000512332 KLRG1Q96E93 195 aa9.84□□□□□ -0.83
CPNE4-210ENST00000512332 CABS1Q96KC9 395 aa9.84□□□□□ -0.83
CPNE4-210ENST00000512332 TRAIPQ9BWF2 469 aa9.84□□□□□ -0.83
CPNE4-210ENST00000512332 AAASQ9NRG9 546 aa9.84□□□□□ -0.83
CPNE4-210ENST00000512332 RBAKQ9NYW8 714 aaPredicted RBP9.84□□□□□ -0.83
CPNE4-210ENST00000512332 CNTNAP2Q9UHC6 1331 aa9.84□□□□□ -0.83
CPNE4-210ENST00000512332 TLDC2A0PJX2 215 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 SPDYE16A6NNV3 312 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-210ENST00000512332 SORBS3O60504 671 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 CLTAP09496 248 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 CHN1P15882 459 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 FGFR4P22455 802 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 ACOT2P49753 483 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 WNT7BP56706 349 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 IFI35P80217 286 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-210ENST00000512332 LACTB2Q53H82 288 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-210ENST00000512332 ZPBP2Q6X784 338 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 CPLX4Q7Z7G2 160 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 SUGP1Q8IWZ8 645 aaKnown RBP9.83□□□□□ -0.84
CPNE4-210ENST00000512332 BBXQ8WY36 941 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-210ENST00000512332 FOXP3Q9BZS1 431 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 HAPLN2Q9GZV7 340 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 AZI2Q9H6S1 392 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 APOBEC3GQ9HC16 384 aaKnown RBP9.83□□□□□ -0.84
CPNE4-210ENST00000512332 CHST7Q9NS84 486 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 ADAM22Q9P0K1 906 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 AFG3L2Q9Y4W6 797 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 PPP2R3BQ9Y5P8 575 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 SIP14410 1827 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 TTC4O95801 387 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 ATP5DP30049 168 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 GNA15P30679 374 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 ZNF132P52740 706 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 EFNA5P52803 228 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 LMNB2Q03252 620 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 QPCTQ16769 361 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 MMS22LQ6ZRQ5 1243 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 CEP128Q6ZU80 1094 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC121Q6ZUS5 278 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 UBR7Q8N806 425 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC89Q8N998 374 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 MDM1Q8TC05 714 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 TMEM143Q96AN5 459 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 MSTO1Q9BUK6 570 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 TRIM7Q9C029 511 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 CDC42EP4Q9H3Q1 356 aaKnown RBP9.83□□□□□ -0.84
CPNE4-210ENST00000512332 NRBP2Q9NSY0 501 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 PARVAQ9NVD7 372 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 FBXO40Q9UH90 709 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 ASIC3Q9UHC3 531 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 PCDHB4Q9Y5E5 795 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 PTPRJQ12913 1337 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 ZNF541Q9H0D2 1346 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 LOC285556D6RIA3 1793 aa9.83□□□□□ -0.84
CPNE4-210ENST00000512332 ADCY3O60266 1144 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 TGFB3P10600 412 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 GHRP10912 638 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 MMP8P22894 467 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 CETN2P41208 172 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 BAG6P46379 1132 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 NOP14P78316 857 aaKnown RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 SP4Q02446 784 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 LRRC38Q5VT99 294 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 DRICH1Q6PGQ1 229 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 TMEM270Q6UE05 265 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 PIGWQ7Z7B1 504 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 RBBP8NLQ8NC74 664 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 FEZF2Q8TBJ5 459 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 EPS8L3Q8TE67 593 aaKnown RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 KAT2BQ92831 832 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 ELMO3Q96BJ8 720 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 TARS2Q9BW92 718 aaKnown RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 KDM4CQ9H3R0 1056 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 INTS9Q9NV88 658 aaKnown RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 IP6K2Q9UHH9 426 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 CAPN7Q9Y6W3 813 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 LRRIQ4A6NIV6 560 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 MAFO75444 373 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 LSM8O95777 96 aaKnown RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 CALCAP01258 141 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 RALAP11233 206 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 ATF2P15336 505 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 EDNRBP24530 442 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 NCOA4Q13772 614 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 ITIH4Q14624 930 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 RNF187Q5TA31 235 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 LMBRD2Q68DH5 695 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 SPOPLQ6IQ16 392 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 WDR49Q8IV35 697 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 BRSK2Q8IWQ3 736 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 RCOR2Q8IZ40 523 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 CCHCR1Q8TD31 782 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 ZNF526Q8TF50 670 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 ZBTB45Q96K62 511 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-210ENST00000512332 SCLT1Q96NL6 688 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 HERPUD2Q9BSE4 406 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 OSBPL8Q9BZF1 889 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms