RNA–Protein interactions for RNA: ENST00000509587.1

MBD4-207, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-207ENST00000509587 NSUN3Q9H649 340 aaKnown RBP18.86■□□□□ 0.61
MBD4-207ENST00000509587 ENTPD7Q9NQZ7 604 aa18.86■□□□□ 0.61
MBD4-207ENST00000509587 MYO9BQ13459 2157 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 LRRIQ3A6PVS8 624 aaPredicted RBP18.85■□□□□ 0.61
MBD4-207ENST00000509587 HIDE1A8MVS5 230 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 TRAPPC3O43617 180 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 CSPG5O95196 566 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 TNNI1P19237 187 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 STX17P56962 302 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 DLG4P78352 724 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 DSG1Q02413 1049 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 SMC1AQ14683 1233 aaKnown RBP18.85■□□□□ 0.61
MBD4-207ENST00000509587 PTPN14Q15678 1187 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 USP41Q3LFD5 358 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 C1orf220Q5T0J3 134 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 FAM171A1Q5VUB5 890 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 PLPP4Q5VZY2 271 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 INTS8Q75QN2 995 aaKnown RBP18.85■□□□□ 0.61
MBD4-207ENST00000509587 GPR65Q8IYL9 337 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 ANKRD36BP1Q96IX9 119 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 B3GALT6Q96L58 329 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 SIX4Q9UIU6 781 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 RWDD2AQ9UIY3 292 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 ITGA11Q9UKX5 1188 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 NUB1Q9Y5A7 615 aa18.85■□□□□ 0.61
MBD4-207ENST00000509587 C2orf71A6NGG8 1288 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 I3L4J1 428 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 IKBKBO14920 756 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 SPTLC1O15269 473 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 SLC16A3O15427 465 aaKnown RBP18.84■□□□□ 0.61
MBD4-207ENST00000509587 CXCL14O95715 111 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 TNNC2P02585 160 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 ITGB3P05106 788 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 TMEM191BP0C7N4 346 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 FGFR3P22607 806 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 PAX3P23760 479 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 GLUD2P49448 558 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 LILRA4P59901 499 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 BMS1Q14692 1282 aaKnown RBP18.84■□□□□ 0.61
MBD4-207ENST00000509587 TCEAL5Q5H9L2 206 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 CAVIN1Q6NZI2 390 aaKnown RBP18.84■□□□□ 0.61
MBD4-207ENST00000509587 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.84■□□□□ 0.61
MBD4-207ENST00000509587 ADGRD2Q7Z7M1 963 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 CSGALNACT2Q8N6G5 542 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 AUTS2Q8WXX7 1259 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 SUSD3Q96L08 255 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 CEP63Q96MT8 703 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 TTPALQ9BTX7 342 aa18.84■□□□□ 0.61
MBD4-207ENST00000509587 MRPL17Q9NRX2 175 aaKnown RBP18.84■□□□□ 0.61
MBD4-207ENST00000509587 M0QZQ0 153 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 URODP06132 367 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 EPB41P11171 864 aaKnown RBP18.83■□□□□ 0.6
MBD4-207ENST00000509587 POLR2BP30876 1174 aaKnown RBP18.83■□□□□ 0.6
MBD4-207ENST00000509587 VAMP7P51809 220 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 AP3M2P53677 418 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 RBP5P82980 135 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 BFSP1Q12934 665 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 CT47A1Q5JQC4 288 aaPredicted RBP18.83■□□□□ 0.6
MBD4-207ENST00000509587 RTP2Q5QGT7 225 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 TRAPPC11Q7Z392 1133 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 FILIP1Q7Z7B0 1213 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 MAFAQ8NHW3 353 aaPredicted RBP18.83■□□□□ 0.6
MBD4-207ENST00000509587 SYAP1Q96A49 352 aaPredicted RBP18.83■□□□□ 0.6
MBD4-207ENST00000509587 RXFP1Q9HBX9 757 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 AGAP1Q9UPQ3 857 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 SSX2IPQ9Y2D8 614 aa18.83■□□□□ 0.6
MBD4-207ENST00000509587 PRRC2BQ5JSZ5 2229 aaKnown RBP18.82■□□□□ 0.6
MBD4-207ENST00000509587 SYN3O14994 580 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 C4BPAP04003 597 aaKnown RBP18.82■□□□□ 0.6
MBD4-207ENST00000509587 KRT13P13646 458 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 ERCC5P28715 1186 aaPredicted RBP18.82■□□□□ 0.6
MBD4-207ENST00000509587 TKTP29401 623 aaKnown RBP18.82■□□□□ 0.6
MBD4-207ENST00000509587 PNPLA4P41247 253 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 HYAL1Q12794 435 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 CCDC85BQ15834 202 aaPredicted RBP18.82■□□□□ 0.6
MBD4-207ENST00000509587 KIAA1841Q6NSI8 718 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 USP37Q86T82 979 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 MICALL1Q8N3F8 863 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 LRRC52Q8N7C0 313 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 PIK3R5Q8WYR1 880 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 DACH1Q9UI36 760 aa18.82■□□□□ 0.6
MBD4-207ENST00000509587 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.81■□□□□ 0.6
MBD4-207ENST00000509587 C2CD2LO14523 706 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 CST3P01034 146 aaPredicted RBP18.81■□□□□ 0.6
MBD4-207ENST00000509587 KRT19P08727 400 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 CNPP09543 421 aaKnown RBP18.81■□□□□ 0.6
MBD4-207ENST00000509587 TAF6P49848 677 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 COL19A1Q14993 1142 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 DUSP6Q16828 381 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 SKOR2Q2VWA4 1001 aaPredicted RBP18.81■□□□□ 0.6
MBD4-207ENST00000509587 TDRD10Q5VZ19 366 aaKnown RBP18.81■□□□□ 0.6
MBD4-207ENST00000509587 SASS6Q6UVJ0 657 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 C15orf39Q6ZRI6 1047 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 CEP57Q86XR8 500 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 LNX1Q8TBB1 728 aaPredicted RBP18.81■□□□□ 0.6
MBD4-207ENST00000509587 RIN2Q8WYP3 895 aaPredicted RBP18.81■□□□□ 0.6
MBD4-207ENST00000509587 PPP2R3CQ969Q6 453 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 ZNF560Q96MR9 790 aa18.81■□□□□ 0.6
MBD4-207ENST00000509587 SRRTQ9BXP5 876 aaKnown RBP18.81■□□□□ 0.6
MBD4-207ENST00000509587 TLE6Q9H808 572 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms