RNA–Protein interactions for RNA: ENST00000508642.1

SPOCK1-205, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 499 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-205ENST00000508642 BMPR1AP36894 532 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 PBX3P40426 434 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 MTIF2P46199 727 aaKnown RBP7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 GUCY2FP51841 1108 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 PPP3CAQ08209 521 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 KCNJ12Q14500 433 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 ZACNQ401N2 412 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 EPC2Q52LR7 807 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 TCP11X2Q5H9J9 407 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 DCAF17Q5H9S7 520 aaPredicted RBP7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 TCERG1LQ5VWI1 586 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 TDRD10Q5VZ19 366 aaKnown RBP7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 C9orf57Q5W0N0 161 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 DCLRE1AQ6PJP8 1040 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 TRAPPC11Q7Z392 1133 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 SLC39A11Q8N1S5 342 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 TMEM130Q8N3G9 435 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 PIP4P2Q8N4L2 257 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 C3orf58Q8NDZ4 430 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 CXorf38Q8TB03 319 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 FAM200AQ8TCP9 573 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 RABGGTAQ92696 567 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 IGSF21Q96ID5 467 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 FAM84AQ96KN4 292 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 C11orf84Q9BUA3 381 aaPredicted RBP7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 COLEC11Q9BWP8 271 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 HSD3B7Q9H2F3 369 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 CBX8Q9HC52 389 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 TMEM8AQ9HCN3 771 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 FANCLQ9NW38 375 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 MARCH5Q9NX47 278 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 SIX4Q9UIU6 781 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 ADAM28Q9UKQ2 775 aa7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.73□□□□□ -1.17
SPOCK1-205ENST00000508642 PRRC2BQ5JSZ5 2229 aaKnown RBP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 NT5C1B-RDH14C9J2C7 533 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 F8W810 466 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 PPEF2O14830 753 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 PMM2O15305 246 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 N4BP1O75113 896 aaKnown RBP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 PHACTR2O75167 634 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 TADA2AO75478 443 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 FGF18O76093 207 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 B3GAT3O94766 335 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 VNN1O95497 513 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 EFEMP2O95967 443 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 ITGB1P05556 798 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 KRT19P08727 400 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 POLR2BP30876 1174 aaKnown RBP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 PNPLA4P41247 253 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 GCLMP48507 274 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 FMO5P49326 533 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 MXI1P50539 228 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 RBP5P82980 135 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 PLCB3Q01970 1234 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 KRT17Q04695 432 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 KCNH2Q12809 1159 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 BIRC3Q13489 604 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 MAN2A1Q16706 1144 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 SV2CQ496J9 727 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 CBWD6Q4V339 395 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 HSP90AA4PQ58FG1 418 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 CBWD3Q5JTY5 395 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 HABP4Q5JVS0 413 aaKnown RBP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 CBWD5Q5RIA9 395 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 KRT39Q6A163 491 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 GPR153Q6NV75 609 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 CD300LGQ6UXG3 332 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 SV2AQ7L0J3 742 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 SPRED2Q7Z698 418 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 DDX53Q86TM3 631 aaKnown RBP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 LUZP1Q86V48 1076 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 TMEM173Q86WV6 379 aaPredicted RBP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 CREBRFQ8IUR6 639 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 LRRC52Q8N7C0 313 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 KLHL23Q8NBE8 558 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 FBXO22Q8NEZ5 403 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 BCL7CQ8WUZ0 217 aaPredicted RBP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 TMEM169Q96HH4 297 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 ZNF560Q96MR9 790 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 TUBGCP2Q9BSJ2 902 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 ZNF576Q9H609 170 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 MMRN2Q9H8L6 949 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 STK39Q9UEW8 545 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 MTUS1Q9ULD2 1270 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 AGAP1Q9UPQ3 857 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 LZTS1Q9Y250 596 aa7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 PRG3Q9Y2Y8 225 aaPredicted RBP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 R3HCC1Q9Y3T6 440 aaKnown RBP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 SF3B1O75533 1304 aaKnown RBP eCLIP7.72□□□□□ -1.17
SPOCK1-205ENST00000508642 DOCK6Q96HP0 2047 aa7.71□□□□□ -1.17
SPOCK1-205ENST00000508642 GOLGA6L19H0YKK7 550 aa7.71□□□□□ -1.18
SPOCK1-205ENST00000508642 H3BNC9 293 aa7.71□□□□□ -1.18
SPOCK1-205ENST00000508642 P4HA2O15460 535 aa7.71□□□□□ -1.18
SPOCK1-205ENST00000508642 TRAPPC3O43617 180 aa7.71□□□□□ -1.18
SPOCK1-205ENST00000508642 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
SPOCK1-205ENST00000508642 CST3P01034 146 aaPredicted RBP7.71□□□□□ -1.18
SPOCK1-205ENST00000508642 HLA-DRAP01903 254 aa7.71□□□□□ -1.18
SPOCK1-205ENST00000508642 AFPP02771 609 aaKnown RBP7.71□□□□□ -1.18
SPOCK1-205ENST00000508642 PRKCSHP14314 528 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms