RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 POLR2AP24928 1970 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 UNC119BA6NIH7 251 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 ZAR1LA6NP61 321 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 USP14P54578 494 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 LGALS4P56470 323 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 IDI1Q13907 227 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 KLHL40Q2TBA0 621 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 BEAN1Q3B7T3 259 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 PDCD4Q53EL6 469 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 DALRD3Q5D0E6 543 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 CT83Q5H943 113 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 PITRM1Q5JRX3 1037 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 CC2D1BQ5T0F9 858 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 BTNL9Q6UXG8 535 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 CLEC17AQ6ZS10 378 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 ARHGEF19Q8IW93 802 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 CMTR2Q8IYT2 770 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 LCORLQ8N3X6 602 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 CPEB3Q8NE35 698 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 SUPT20HQ8NEM7 779 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 RSAD2Q8WXG1 361 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 TFAP2CQ92754 450 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 SLC5A5Q92911 643 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 VOPP1Q96AW1 172 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 MFSD3Q96ES6 412 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 CEP95Q96GE4 821 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 PDLIM2Q96JY6 352 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 KCTD10Q9H3F6 313 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 SYNPO2LQ9H987 977 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 NOC2LQ9Y3T9 749 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 UBR1Q8IWV7 1749 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 MTUS2Q5JR59 1369 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 PNPLA6Q8IY17 1366 aa5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 RPRD2Q5VT52 1461 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-211ENST00000508531 DIP2AQ14689 1571 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 ADGBQ8N7X0 1667 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 GAGE12BA1L429 117 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 GAGE12HA6NDE8 117 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 TBKBP1A7MCY6 615 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 B5MCH6 92 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 DIRC3C9JPN6 131 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 MCCP23508 829 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 MEF2AQ02078 507 aaPredicted RBP5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 TAP1Q03518 808 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 C19orf54Q5BKX5 351 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 EFCAB12Q6NXP0 572 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 DRICH1Q6PGQ1 229 aaPredicted RBP5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 PLXDC1Q8IUK5 500 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 FAM184AQ8NB25 1140 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 LEO1Q8WVC0 666 aaPredicted RBP5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 SNX21Q969T3 373 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 GPRC5DQ9NZD1 345 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 DKK2Q9UBU2 259 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 EDARQ9UNE0 448 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 PLAAQ9Y263 795 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 TNFRSF18Q9Y5U5 241 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 MRPL42Q9Y6G3 142 aaKnown RBP5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 ATRNO75882 1429 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 NCOA3Q9Y6Q9 1424 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 SLIT1O75093 1534 aa5.38□□□□□ -1.55
PDLIM5-211ENST00000508531 AHDC1Q5TGY3 1603 aaPredicted RBP5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 LRRIQ1Q96JM4 1722 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 KIAA0355O15063 1070 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 RBP3P10745 1247 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 CTSSP25774 331 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 TNNT3P45378 269 aaPredicted RBP5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 ATP13A4Q4VNC1 1196 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 CCDC184Q52MB2 194 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 PRAMEF14Q5SWL7 426 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 STRIP1Q5VSL9 837 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 CAVIN1Q6NZI2 390 aaKnown RBP5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 PRIMA1Q86XR5 153 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 MNS1Q8NEH6 495 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 SYAP1Q96A49 352 aaPredicted RBP5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 CHMP4AQ9BY43 222 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 PTGFRNQ9P2B2 879 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 CGNQ9P2M7 1197 aaKnown RBP5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 MAP3K2Q9Y2U5 619 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 USP15Q9Y4E8 981 aaPredicted RBP5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 KIF16BQ96L93 1317 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 NAIPQ13075 1403 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 NWD1Q149M9 1564 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 MAST1Q9Y2H9 1570 aa5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 KDM5AP29375 1690 aaKnown RBP5.37□□□□□ -1.55
PDLIM5-211ENST00000508531 GSG1L2A8MUP6 293 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 ADCY6O43306 1168 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 SPATA31D3P0C874 917 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 FBLP22087 321 aaKnown RBP5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 MGAT1P26572 445 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 BMPR1AP36894 532 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 GUCY1B3Q02153 619 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 TP53BP2Q13625 1128 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 PDCD1Q15116 288 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 EZH2Q15910 746 aaKnown RBP5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 CCDC142Q17RM4 750 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 BMT2Q1RMZ1 405 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 MFSD14BQ5SR56 506 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 SPATA31D4Q6ZUB0 917 aa5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 PDZD4Q76G19 769 aaPredicted RBP5.36□□□□□ -1.55
PDLIM5-211ENST00000508531 JAZF1Q86VZ6 243 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms