RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 SF3A3Q12874 501 aaKnown RBP eCLIP23.46■■□□□ 1.35
SPCS3-203ENST00000507678 SCARA5Q6ZMJ2 495 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 TRAPPC12Q8WVT3 735 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 PPM1EQ8WY54 764 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 MTMR12Q9C0I1 747 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 STYXL1Q9Y6J8 313 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 LCTP09848 1927 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 CLDN10P78369 228 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 NLRP14Q86W24 1093 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 CLMNQ96JQ2 1002 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 CCT8L2Q96SF2 557 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 PLVAPQ9BX97 442 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 AZI2Q9H6S1 392 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 CD2APQ9Y5K6 639 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 ARIH2O95376 493 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 CLTAP09496 248 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 CORO7P57737 925 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 BPIFB4P59827 614 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 TMEM132AQ24JP5 1023 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 HSDL1Q3SXM5 330 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 NOL9Q5SY16 702 aaKnown RBP23.46■■□□□ 1.35
SPCS3-203ENST00000507678 RNF149Q8NC42 400 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 CGRRF1Q99675 332 aa23.46■■□□□ 1.35
SPCS3-203ENST00000507678 R3HDM2Q9Y2K5 976 aaKnown RBP23.46■■□□□ 1.35
SPCS3-203ENST00000507678 CALCOCO2Q13137 446 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 MON1BQ7L1V2 547 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 C1orf131Q8NDD1 294 aaKnown RBP23.45■■□□□ 1.34
SPCS3-203ENST00000507678 ZNF473Q8WTR7 871 aaKnown RBP23.45■■□□□ 1.34
SPCS3-203ENST00000507678 NIFKQ9BYG3 293 aaKnown RBP23.45■■□□□ 1.34
SPCS3-203ENST00000507678 CCDC113Q9H0I3 377 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 CNTNAP2Q9UHC6 1331 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 A6NNZ2 444 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 ADCY3O60266 1144 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 LDHAP00338 332 aaKnown RBP23.45■■□□□ 1.34
SPCS3-203ENST00000507678 CENPCQ03188 943 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 TUBB8Q3ZCM7 444 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 MYCBPAPQ8TBZ2 947 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 EPS8L3Q8TE67 593 aaKnown RBP23.45■■□□□ 1.34
SPCS3-203ENST00000507678 SELENOSQ9BQE4 189 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 IMPG2Q9BZV3 1241 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 SLC12A6Q9UHW9 1150 aa23.45■■□□□ 1.34
SPCS3-203ENST00000507678 NOP56O00567 594 aaKnown RBP23.44■■□□□ 1.34
SPCS3-203ENST00000507678 CYP1A1P04798 512 aaPredicted RBP23.44■■□□□ 1.34
SPCS3-203ENST00000507678 RALAP11233 206 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 DRG2P55039 364 aaKnown RBP23.44■■□□□ 1.34
SPCS3-203ENST00000507678 TAS2R40P59535 323 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 NOMO3P69849 1222 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 CYP1B1Q16678 543 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 SH3D19Q5HYK7 790 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 TMEM63BQ5T3F8 832 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 LIN9Q5TKA1 542 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 FAM160B1Q5W0V3 765 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 PRUNE1Q86TP1 453 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 ABRAQ8N0Z2 381 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 LIG3P49916 1009 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 AGBL2Q5U5Z8 902 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 ZNF677Q86XU0 584 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 RIOX2Q8IUF8 465 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 THNSL1Q8IYQ7 743 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 GPC2Q8N158 579 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 TMEM130Q8N3G9 435 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 SEPT1Q8WYJ6 367 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 NLRP4Q96MN2 994 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 PPP1R16BQ96T49 567 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 KCNG1Q9UIX4 513 aa23.44■■□□□ 1.34
SPCS3-203ENST00000507678 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.44■■□□□ 1.34
SPCS3-203ENST00000507678 PI4K2BG5E9Z4 385 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 TLR3O15455 904 aaKnown RBP23.43■■□□□ 1.34
SPCS3-203ENST00000507678 ACSL3O95573 720 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 MYL6P60660 151 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 TFAMQ00059 246 aaKnown RBP23.43■■□□□ 1.34
SPCS3-203ENST00000507678 NEDD9Q14511 834 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 RHPN2Q8IUC4 686 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 PWWP2AQ96N64 755 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 IGKV6D-21A0A0A0MT36 114 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 FSCN2O14926 492 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 MYCNP04198 464 aaPredicted RBP23.43■■□□□ 1.34
SPCS3-203ENST00000507678 IFI35P80217 286 aaPredicted RBP23.43■■□□□ 1.34
SPCS3-203ENST00000507678 MAMLD1Q13495 774 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 TTLL12Q14166 644 aaPredicted RBP23.43■■□□□ 1.34
SPCS3-203ENST00000507678 ATP13A4Q4VNC1 1196 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 KAZNQ674X7 775 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 CHADLQ6NUI6 762 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 HOOK3Q86VS8 718 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 COPS5Q92905 334 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 DDX23Q9BUQ8 820 aaKnown RBP23.43■■□□□ 1.34
SPCS3-203ENST00000507678 AVENQ9NQS1 362 aaPredicted RBP23.43■■□□□ 1.34
SPCS3-203ENST00000507678 PARP2Q9UGN5 583 aa23.43■■□□□ 1.34
SPCS3-203ENST00000507678 ADGRA2Q96PE1 1338 aa23.42■■□□□ 1.34
SPCS3-203ENST00000507678 WEE2P0C1S8 567 aa23.42■■□□□ 1.34
SPCS3-203ENST00000507678 POTEJP0CG39 1038 aa23.42■■□□□ 1.34
SPCS3-203ENST00000507678 BRD2P25440 801 aaKnown RBP23.42■■□□□ 1.34
SPCS3-203ENST00000507678 ABCD1P33897 745 aa23.42■■□□□ 1.34
SPCS3-203ENST00000507678 FNTAP49354 379 aa23.42■■□□□ 1.34
SPCS3-203ENST00000507678 EIF3BP55884 814 aaKnown RBP23.42■■□□□ 1.34
SPCS3-203ENST00000507678 RPL7AP62424 266 aaKnown RBP23.42■■□□□ 1.34
SPCS3-203ENST00000507678 TARBP2Q15633 366 aaKnown RBP23.42■■□□□ 1.34
SPCS3-203ENST00000507678 CCDC38Q502W7 563 aa23.42■■□□□ 1.34
SPCS3-203ENST00000507678 EP400NLQ6ZTU2 488 aa23.42■■□□□ 1.34
SPCS3-203ENST00000507678 DDX27Q96GQ7 796 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms