RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 OR5B17Q8NGF7 314 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 PLEKHO2Q8TD55 490 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 RIN2Q8WYP3 895 aaPredicted RBP19.67■□□□□ 0.74
NPHP4-210ENST00000506941 PABPC5Q96DU9 382 aaKnown RBP19.67■□□□□ 0.74
NPHP4-210ENST00000506941 TTPALQ9BTX7 342 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 MTMR12Q9C0I1 747 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.66■□□□□ 0.74
NPHP4-210ENST00000506941 CLASP2O75122 1294 aaKnown RBP19.66■□□□□ 0.74
NPHP4-210ENST00000506941 TBX10O75333 385 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 CNPP09543 421 aaKnown RBP19.66■□□□□ 0.74
NPHP4-210ENST00000506941 NR2F2P24468 414 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 DLX2Q07687 328 aaPredicted RBP19.66■□□□□ 0.74
NPHP4-210ENST00000506941 ADAM15Q13444 863 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 KCNC3Q14003 757 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 MYBPC2Q14324 1141 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 BMS1Q14692 1282 aaKnown RBP19.66■□□□□ 0.74
NPHP4-210ENST00000506941 CENPPQ6IPU0 288 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 KIAA1841Q6NSI8 718 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.66■□□□□ 0.74
NPHP4-210ENST00000506941 CEP57Q86XR8 500 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 C1orf127Q8N9H9 656 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 CXorf38Q8TB03 319 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 SUSD3Q96L08 255 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 POP1Q99575 1024 aaKnown RBP19.66■□□□□ 0.74
NPHP4-210ENST00000506941 GTPBP4Q9BZE4 634 aaKnown RBP19.66■□□□□ 0.74
NPHP4-210ENST00000506941 NUP62CLQ9H1M0 184 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 UBE2ZQ9H832 354 aaPredicted RBP19.66■□□□□ 0.74
NPHP4-210ENST00000506941 INTS13Q9NVM9 706 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 CLDND1Q9NY35 253 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 NUB1Q9Y5A7 615 aa19.66■□□□□ 0.74
NPHP4-210ENST00000506941 TRIM49BA6NDI0 452 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 PPP1R3GB7ZBB8 358 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 SPTLC1O15269 473 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 DLATP10515 647 aaKnown RBP19.65■□□□□ 0.74
NPHP4-210ENST00000506941 MCM4P33991 863 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 AARSP49588 968 aaKnown RBP eCLIP19.65■□□□□ 0.74
NPHP4-210ENST00000506941 TFF2Q03403 129 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 SURF1Q15526 300 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 EDRF1Q3B7T1 1238 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 WDR49Q8IV35 697 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 LNX1Q8TBB1 728 aaPredicted RBP19.65■□□□□ 0.74
NPHP4-210ENST00000506941 PIK3R5Q8WYR1 880 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 HLA-CQ95604 372 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 CCDC127Q96BQ5 260 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 KLHL5Q96PQ7 755 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 CDCA3Q99618 268 aaPredicted RBP19.65■□□□□ 0.74
NPHP4-210ENST00000506941 CGRRF1Q99675 332 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 RXFP1Q9HBX9 757 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 SIX4Q9UIU6 781 aa19.65■□□□□ 0.74
NPHP4-210ENST00000506941 TEX28O15482 410 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 TRAPPC3O43617 180 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 AKAP3O75969 853 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 ITGB3P05106 788 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 RPL17P18621 184 aaKnown RBP19.64■□□□□ 0.73
NPHP4-210ENST00000506941 LILRA4P59901 499 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 PSMD5Q16401 504 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 CEP135Q66GS9 1140 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 ANKRD40Q6AI12 368 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 LLGL2Q6P1M3 1020 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 GPR65Q8IYL9 337 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 CACTINQ8WUQ7 758 aaKnown RBP19.64■□□□□ 0.73
NPHP4-210ENST00000506941 EEF2KMTQ96G04 330 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 THEGQ9P2T0 379 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 SSX2IPQ9Y2D8 614 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 VCANP13611 3396 aa19.64■□□□□ 0.73
NPHP4-210ENST00000506941 DOCK6Q96HP0 2047 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 M0QZQ0 153 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 NCK2O43639 380 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 TMEM191BP0C7N4 346 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 CCNE1P24864 410 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 POLR2BP30876 1174 aaKnown RBP19.63■□□□□ 0.73
NPHP4-210ENST00000506941 ADAM9Q13443 819 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 EP400NLQ6ZTU2 488 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 ZC3H3Q8IXZ2 948 aaKnown RBP19.63■□□□□ 0.73
NPHP4-210ENST00000506941 TRIML1Q8N9V2 468 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 PARD3BQ8TEW8 1205 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 SLC22A17Q8WUG5 538 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 ZNF516Q92618 1163 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 DHTKD1Q96HY7 919 aaPredicted RBP19.63■□□□□ 0.73
NPHP4-210ENST00000506941 ANKRD36BP1Q96IX9 119 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 FNBP1Q96RU3 617 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 EMILIN2Q9BXX0 1053 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 CLEC1BQ9P126 229 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 FNIP2Q9P278 1114 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 ITGA11Q9UKX5 1188 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 BARX2Q9UMQ3 279 aaPredicted RBP19.63■□□□□ 0.73
NPHP4-210ENST00000506941 COG5Q9UP83 839 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 HCFC2Q9Y5Z7 792 aa19.63■□□□□ 0.73
NPHP4-210ENST00000506941 LRRIQ3A6PVS8 624 aaPredicted RBP19.62■□□□□ 0.73
NPHP4-210ENST00000506941 PSMA7O14818 248 aa19.62■□□□□ 0.73
NPHP4-210ENST00000506941 SYN3O14994 580 aa19.62■□□□□ 0.73
NPHP4-210ENST00000506941 MAPK13O15264 365 aa19.62■□□□□ 0.73
NPHP4-210ENST00000506941 ADAM12O43184 909 aa19.62■□□□□ 0.73
NPHP4-210ENST00000506941 EPCAMP16422 314 aa19.62■□□□□ 0.73
NPHP4-210ENST00000506941 TNNI1P19237 187 aa19.62■□□□□ 0.73
NPHP4-210ENST00000506941 KCNA5P22460 613 aa19.62■□□□□ 0.73
NPHP4-210ENST00000506941 RPL13P26373 211 aaKnown RBP19.62■□□□□ 0.73
NPHP4-210ENST00000506941 CLCN4P51793 760 aa19.62■□□□□ 0.73
NPHP4-210ENST00000506941 DLG4P78352 724 aa19.62■□□□□ 0.73
NPHP4-210ENST00000506941 CLDN10P78369 228 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms