RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 COBLL1Q53SF7 1204 aa21.52■■□□□ 1.04
SNX25-204ENST00000506896 ZSWIM2Q8NEG5 633 aa21.52■■□□□ 1.04
SNX25-204ENST00000506896 CACTINQ8WUQ7 758 aaKnown RBP21.52■■□□□ 1.04
SNX25-204ENST00000506896 EMILIN2Q9BXX0 1053 aa21.52■■□□□ 1.04
SNX25-204ENST00000506896 TRAF3IP3Q9Y228 551 aa21.52■■□□□ 1.04
SNX25-204ENST00000506896 NUB1Q9Y5A7 615 aa21.52■■□□□ 1.04
SNX25-204ENST00000506896 SRGAP2BP0DMP2 458 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 PAX3P23760 479 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 ZP2Q05996 745 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 KIAA0319Q5VV43 1072 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 PDXDC1Q6P996 788 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 SYCE2Q6PIF2 218 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.51■■□□□ 1.03
SNX25-204ENST00000506896 TAS1R1Q7RTX1 841 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 CBWD2Q8IUF1 395 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 GJD3Q8N144 294 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 TTPALQ9BTX7 342 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 S1PR5Q9H228 398 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.51■■□□□ 1.03
SNX25-204ENST00000506896 HCFC2Q9Y5Z7 792 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 ANK1P16157 1881 aa21.51■■□□□ 1.03
SNX25-204ENST00000506896 EXOC3O60645 756 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 NFIL3Q16649 462 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 FAM171A1Q5VUB5 890 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 ANKRD54Q6NXT1 300 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 CD300LGQ6UXG3 332 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 PPFIBP1Q86W92 1011 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 ADHFE1Q8IWW8 467 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 C3orf58Q8NDZ4 430 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 KHSRPQ92945 711 aaKnown RBP eCLIP21.5■■□□□ 1.03
SNX25-204ENST00000506896 LMBRD1Q9NUN5 540 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 DMAC2Q9NW81 257 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 MAPK8IP1Q9UQF2 711 aa21.5■■□□□ 1.03
SNX25-204ENST00000506896 C2CD2LO14523 706 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 NR3C1P04150 777 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 FGFR3P22607 806 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 PPP1R2P41236 205 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 LLGL2Q6P1M3 1020 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 EFCAB13Q8IY85 973 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 SLC22A17Q8WUG5 538 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 SUSD6Q92537 303 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 CASP10Q92851 521 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 ERCC4Q92889 916 aaPredicted RBP21.49■■□□□ 1.03
SNX25-204ENST00000506896 RXFP1Q9HBX9 757 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 PDE11AQ9HCR9 933 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 DPP3Q9NY33 737 aa21.49■■□□□ 1.03
SNX25-204ENST00000506896 SYN3O14994 580 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 HOXB8P17481 243 aaPredicted RBP21.48■■□□□ 1.03
SNX25-204ENST00000506896 RPL13P26373 211 aaKnown RBP21.48■■□□□ 1.03
SNX25-204ENST00000506896 MCM4P33991 863 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 TFAMQ00059 246 aaKnown RBP21.48■■□□□ 1.03
SNX25-204ENST00000506896 CYP24A1Q07973 514 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 STIM1Q13586 685 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 RTP2Q5QGT7 225 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 C9orf57Q5W0N0 161 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 CEP57Q86XR8 500 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 RIN2Q8WYP3 895 aaPredicted RBP21.48■■□□□ 1.03
SNX25-204ENST00000506896 PIK3R5Q8WYR1 880 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 SUSD3Q96L08 255 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 KLHL5Q96PQ7 755 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 FNIP2Q9P278 1114 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 MAN1B1Q9UKM7 699 aa21.48■■□□□ 1.03
SNX25-204ENST00000506896 USP15Q9Y4E8 981 aaPredicted RBP21.48■■□□□ 1.03
SNX25-204ENST00000506896 ANO9A1A5B4 782 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 TULP1O00294 542 aaPredicted RBP21.47■■□□□ 1.03
SNX25-204ENST00000506896 PIRO00625 290 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 C1RP00736 705 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 ADH1AP07327 375 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 CNPP09543 421 aaKnown RBP21.47■■□□□ 1.03
SNX25-204ENST00000506896 IGFBP6P24592 240 aaPredicted RBP21.47■■□□□ 1.03
SNX25-204ENST00000506896 PRCPP42785 496 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 WNT7BP56706 349 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 PSMD6Q15008 389 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 EDRF1Q3B7T1 1238 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 WDR49Q8IV35 697 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 SMYD4Q8IYR2 804 aaPredicted RBP21.47■■□□□ 1.03
SNX25-204ENST00000506896 TRIML1Q8N9V2 468 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 RDH13Q8NBN7 331 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 ANKRD36BP1Q96IX9 119 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 B3GALT6Q96L58 329 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 MFSD14AQ96MC6 490 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 FNBP1Q96RU3 617 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 ITGA11Q9UKX5 1188 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 FRMD4BQ9Y2L6 1034 aa21.47■■□□□ 1.03
SNX25-204ENST00000506896 ARHGEF37A1IGU5 675 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 TEX28O15482 410 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 TMEM191BP0C7N4 346 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 KLRC2P26717 231 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 BRCC3P46736 316 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 AARSP49588 968 aaKnown RBP eCLIP21.46■■□□□ 1.03
SNX25-204ENST00000506896 GUCY2FP51841 1108 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 DUOXA2Q1HG44 320 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 ZCWPW2Q504Y3 356 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 ANKS3Q6ZW76 656 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 ADSSL1Q8N142 457 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 APPL2Q8NEU8 664 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 INTS13Q9NVM9 706 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 KIAA1468Q9P260 1216 aa21.46■■□□□ 1.03
SNX25-204ENST00000506896 PI4K2BG5E9Z4 385 aa21.45■■□□□ 1.02
SNX25-204ENST00000506896 M0QZQ0 153 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms