RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 JADE1Q6IE81 842 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 FUT10Q6P4F1 479 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 CDR2LQ86X02 465 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-205ENST00000506880 TOP6BLQ8N6T0 577 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 CEP120Q8N960 986 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 KLHL23Q8NBE8 558 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 GLIS3Q8NEA6 775 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 C2orf15Q8WU43 125 aaKnown RBP9.13□□□□□ -0.95
PDGFC-205ENST00000506880 HPS3Q969F9 1004 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 TTPALQ9BTX7 342 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 APOL6Q9BWW8 343 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 ZBP1Q9H171 429 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 NSUN3Q9H649 340 aaKnown RBP9.13□□□□□ -0.95
PDGFC-205ENST00000506880 RXFP1Q9HBX9 757 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 MRPL17Q9NRX2 175 aaKnown RBP9.13□□□□□ -0.95
PDGFC-205ENST00000506880 PCDHB8Q9UN66 801 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 NUB1Q9Y5A7 615 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 COL4A4P53420 1690 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-205ENST00000506880 VWA8A3KMH1 1905 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 LCHNA4D1U4 455 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 LRRC10BA6NIK2 292 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 OR6C75A6NL08 312 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 MEIS3P2A8K0S8 358 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 GRXCR1A8MXD5 290 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 CLIC2O15247 247 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 TACC1O75410 805 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 AKAP3O75969 853 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 ITGB1P05556 798 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 ADH1AP07327 375 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 ODC1P11926 461 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 HARSP12081 509 aaKnown RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 HOXB8P17481 243 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 HOXA9P31269 272 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 PBX2P40425 430 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 TNFSF9P41273 254 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 OR1G1P47890 313 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 LHX1P48742 406 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 GLUD2P49448 558 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 LILRA4P59901 499 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 YWHAEP62258 255 aaKnown RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 MYL5Q02045 173 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 MAPRE1Q15691 268 aaKnown RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 TPD52L1Q16890 204 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 UVSSAQ2YD98 709 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 PAN2Q504Q3 1202 aaKnown RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 CEP135Q66GS9 1140 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 TPGS2Q68CL5 300 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 CAVIN1Q6NZI2 390 aaKnown RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 FAM117BQ6P1L5 589 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 TMEM184AQ6ZMB5 413 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 C15orf39Q6ZRI6 1047 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 ENOSF1Q7L5Y1 443 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 TRAPPC11Q7Z392 1133 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 LIMS2Q7Z4I7 341 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 ZNF280BQ86YH2 543 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 CBWD2Q8IUF1 395 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 TRIM59Q8IWR1 403 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 MRPL43Q8N983 215 aaKnown RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 IQCDQ96DY2 449 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 SAAL1Q96ER3 474 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 ZMAT2Q96NC0 199 aaKnown RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 TTYH1Q9H313 450 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 PLEKHA4Q9H4M7 779 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 PCIF1Q9H4Z3 704 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 CYP3A43Q9HB55 503 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 DZANK1Q9NVP4 752 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 MIOSQ9NXC5 875 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 MTMR10Q9NXD2 777 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 TMEM63CQ9P1W3 806 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 MAGEC2Q9UBF1 373 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-205ENST00000506880 COG5Q9UP83 839 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 STXBP5LQ9Y2K9 1186 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 NCOR1O75376 2440 aa9.12□□□□□ -0.95
PDGFC-205ENST00000506880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-205ENST00000506880 KPNA7A9QM74 516 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 LILRB3O75022 631 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 C4BPAP04003 597 aaKnown RBP9.11□□□□□ -0.95
PDGFC-205ENST00000506880 TBXAS1P24557 533 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-205ENST00000506880 PCSK1P29120 753 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 NDUFV1P49821 464 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 MXI1P50539 228 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 OSTNP61366 133 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 TFAMQ00059 246 aaKnown RBP9.11□□□□□ -0.95
PDGFC-205ENST00000506880 TYRO3Q06418 890 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 TRPC3Q13507 836 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 MRPL58Q14197 206 aaKnown RBP9.11□□□□□ -0.95
PDGFC-205ENST00000506880 NFKBIBQ15653 356 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 PUS10Q3MIT2 529 aaKnown RBP9.11□□□□□ -0.95
PDGFC-205ENST00000506880 KIAA0319Q5VV43 1072 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 ZNF280DQ6N043 979 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 KIAA1841Q6NSI8 718 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 METTL23Q86XA0 190 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 EFCAB13Q8IY85 973 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 VPS52Q8N1B4 723 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 MICALL1Q8N3F8 863 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 DEFB123Q8N688 67 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 C1orf127Q8N9H9 656 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 FBXL13Q8NEE6 735 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 CXorf38Q8TB03 319 aa9.11□□□□□ -0.95
PDGFC-205ENST00000506880 POF1BQ8WVV4 589 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms