RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ENOX2Q16206 610 aaKnown RBP14.25□□□□□ -0.13
TCOF1-209ENST00000506630 KIAA1841Q6NSI8 718 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 ARMCX5Q6P1M9 558 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 KRBA2Q6ZNG9 492 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 TAS1R1Q7RTX1 841 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 RNF168Q8IYW5 571 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-209ENST00000506630 ZDHHC14Q8IZN3 488 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 C18orf25Q96B23 403 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-209ENST00000506630 SAAL1Q96ER3 474 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 B3GALT6Q96L58 329 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 GPR62Q9BZJ7 368 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 PLEKHA5Q9HAU0 1116 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 SLC39A2Q9NP94 309 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 MRPL17Q9NRX2 175 aaKnown RBP14.25□□□□□ -0.13
TCOF1-209ENST00000506630 DZANK1Q9NVP4 752 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 LIMD1Q9UGP4 676 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 CPSF3Q9UKF6 684 aaKnown RBP14.25□□□□□ -0.13
TCOF1-209ENST00000506630 TSC2P49815 1807 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 TULP1O00294 542 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-209ENST00000506630 PODXLO00592 558 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 CLASP2O75122 1294 aaKnown RBP14.24□□□□□ -0.13
TCOF1-209ENST00000506630 B3GAT3O94766 335 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 ASGR2P07307 311 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 GARTP22102 1010 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 ADSSP30520 456 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 UPP1Q16831 310 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 USP41Q3LFD5 358 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 KMT5BQ4FZB7 885 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 RARS2Q5T160 578 aaKnown RBP14.24□□□□□ -0.13
TCOF1-209ENST00000506630 EPM2AIP1Q7L775 607 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-209ENST00000506630 FRMD5Q7Z6J6 570 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 NELFCDQ8IXH7 590 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 CCDC34Q96HJ3 373 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 CBWD1Q9BRT8 395 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 EMILIN2Q9BXX0 1053 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 PCIF1Q9H4Z3 704 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 TUBGCP4Q9UGJ1 667 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 USTQ9Y2C2 406 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 SSX2IPQ9Y2D8 614 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 IRAK3Q9Y616 596 aa14.24□□□□□ -0.13
TCOF1-209ENST00000506630 TMEM189-UBE2V1I3L0A0 370 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 XPOTO43592 962 aaKnown RBP14.23□□□□□ -0.13
TCOF1-209ENST00000506630 EFEMP2O95967 443 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 RPN1P04843 607 aaKnown RBP14.23□□□□□ -0.13
TCOF1-209ENST00000506630 WEE2P0C1S8 567 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 DSG1Q02413 1049 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 ELAVL2Q12926 359 aaKnown RBP14.23□□□□□ -0.13
TCOF1-209ENST00000506630 FAM171A1Q5VUB5 890 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 JADE1Q6IE81 842 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 DCLRE1AQ6PJP8 1040 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 CEP57Q86XR8 500 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 CD302Q8IX05 232 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 ADSSL1Q8N142 457 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 C12orf76Q8N812 135 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-209ENST00000506630 FLCNQ8NFG4 579 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 ZNF507Q8TCN5 953 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 SCFD1Q8WVM8 642 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 CCDC47Q96A33 483 aaKnown RBP14.23□□□□□ -0.13
TCOF1-209ENST00000506630 ACSF2Q96CM8 615 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-209ENST00000506630 DDX27Q96GQ7 796 aaKnown RBP14.23□□□□□ -0.13
TCOF1-209ENST00000506630 FAM213AQ9BRX8 229 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 SMOC2Q9H3U7 446 aa14.23□□□□□ -0.13
TCOF1-209ENST00000506630 UBQLN1Q9UMX0 589 aaKnown RBP14.23□□□□□ -0.13
TCOF1-209ENST00000506630 GOLGA8IPA6NC78 632 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 GOLGA8JA6NMD2 632 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 LDHAP00338 332 aaKnown RBP14.22□□□□□ -0.13
TCOF1-209ENST00000506630 NFICP08651 508 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 CNPP09543 421 aaKnown RBP14.22□□□□□ -0.13
TCOF1-209ENST00000506630 EPCAMP16422 314 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 IGFBP6P24592 240 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-209ENST00000506630 KLRC2P26717 231 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 HOXD13P35453 343 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 BRCC3P46736 316 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 GUCY2FP51841 1108 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 TMEM132DQ14C87 1099 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 RTP2Q5QGT7 225 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 CRELD2Q6UXH1 353 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-209ENST00000506630 GLYCTKQ8IVS8 523 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 FMR1NBQ8N0W7 255 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-209ENST00000506630 TMEM130Q8N3G9 435 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 C3orf58Q8NDZ4 430 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 ZSWIM2Q8NEG5 633 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 BEST2Q8NFU1 509 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 RIN2Q8WYP3 895 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-209ENST00000506630 KLHL5Q96PQ7 755 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 TTPALQ9BTX7 342 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 CHST7Q9NS84 486 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 NUB1Q9Y5A7 615 aa14.22□□□□□ -0.13
TCOF1-209ENST00000506630 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 I3L4J1 428 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 TRAPPC3O43617 180 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 LILRB3O75022 631 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 ADRB2P07550 413 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 RPL9P32969 192 aaKnown RBP14.21□□□□□ -0.13
TCOF1-209ENST00000506630 MCM4P33991 863 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 CREMQ03060 361 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 FAM160A1Q05DH4 1040 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 DPYDQ12882 1025 aa14.21□□□□□ -0.13
TCOF1-209ENST00000506630 STK4Q13043 487 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms