RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 CAPN12Q6ZSI9 719 aa17.03■□□□□ 0.32
DDX41-205ENST00000505081 ZNF365Q70YC5 407 aa17.03■□□□□ 0.32
DDX41-205ENST00000505081 CKAP2Q8WWK9 683 aa17.03■□□□□ 0.32
DDX41-205ENST00000505081 ACSF2Q96CM8 615 aaPredicted RBP17.03■□□□□ 0.32
DDX41-205ENST00000505081 RMDN2Q96LZ7 410 aa17.03■□□□□ 0.32
DDX41-205ENST00000505081 NTPCRQ9BSD7 190 aaKnown RBP17.03■□□□□ 0.32
DDX41-205ENST00000505081 OSBPL8Q9BZF1 889 aa17.03■□□□□ 0.32
DDX41-205ENST00000505081 HAPLN2Q9GZV7 340 aa17.03■□□□□ 0.32
DDX41-205ENST00000505081 ECT2Q9H8V3 914 aa17.03■□□□□ 0.32
DDX41-205ENST00000505081 AVENQ9NQS1 362 aaPredicted RBP17.03■□□□□ 0.32
DDX41-205ENST00000505081 CTDP1Q9Y5B0 961 aaPredicted RBP17.03■□□□□ 0.32
DDX41-205ENST00000505081 WNT10BO00744 389 aa17.02■□□□□ 0.32
DDX41-205ENST00000505081 VNN1O95497 513 aa17.02■□□□□ 0.32
DDX41-205ENST00000505081 SFNP31947 248 aa17.02■□□□□ 0.32
DDX41-205ENST00000505081 PIK3CAP42336 1068 aa17.02■□□□□ 0.32
DDX41-205ENST00000505081 MTMR2Q13614 643 aa17.02■□□□□ 0.32
DDX41-205ENST00000505081 ACCSLQ4AC99 568 aa17.02■□□□□ 0.32
DDX41-205ENST00000505081 GSTA5Q7RTV2 222 aa17.02■□□□□ 0.32
DDX41-205ENST00000505081 ATG4CQ96DT6 458 aa17.02■□□□□ 0.32
DDX41-205ENST00000505081 TGS1Q96RS0 853 aaKnown RBP17.02■□□□□ 0.32
DDX41-205ENST00000505081 FHDC1Q9C0D6 1143 aaPredicted RBP17.02■□□□□ 0.32
DDX41-205ENST00000505081 MCM8Q9UJA3 840 aa17.02■□□□□ 0.32
DDX41-205ENST00000505081 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
DDX41-205ENST00000505081 A8MUI8 341 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 EGFRP00533 1210 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 CYP1A1P04798 512 aaPredicted RBP17.02■□□□□ 0.31
DDX41-205ENST00000505081 GSTA1P08263 222 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 GTF2H1P32780 548 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 CENPCQ03188 943 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 TMED2Q15363 201 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 MTERF2Q49AM1 385 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 FAM47EQ6ZV65 393 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 CCDC60Q8IWA6 550 aaPredicted RBP17.02■□□□□ 0.31
DDX41-205ENST00000505081 SAMD3Q8N6K7 520 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 GRK7Q8WTQ7 553 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 SPIRE2Q8WWL2 714 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 PRCCQ92733 491 aaPredicted RBP17.02■□□□□ 0.31
DDX41-205ENST00000505081 PAIP2Q9BPZ3 127 aaKnown RBP17.02■□□□□ 0.31
DDX41-205ENST00000505081 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.31
DDX41-205ENST00000505081 ADAM22Q9P0K1 906 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 L3MBTL1Q9Y468 752 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 PCDHB4Q9Y5E5 795 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.02■□□□□ 0.31
DDX41-205ENST00000505081 ZNF541Q9H0D2 1346 aa17.02■□□□□ 0.31
DDX41-205ENST00000505081 GSTTP1A0A1W2PQM5 241 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 PLSCR1O15162 318 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 SPAG7O75391 227 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 RGS20O76081 388 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 ACO1P21399 889 aaKnown RBP17.01■□□□□ 0.31
DDX41-205ENST00000505081 STX2P32856 288 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 GHRHRQ02643 423 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 MAMLD1Q13495 774 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 P3H1Q32P28 736 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 ZFYVE27Q5T4F4 411 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 FITM2Q8N6M3 262 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 SLC17A8Q8NDX2 589 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 TMEM143Q96AN5 459 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 MRRFQ96E11 262 aaKnown RBP17.01■□□□□ 0.31
DDX41-205ENST00000505081 FNBP1Q96RU3 617 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 RPAP3Q9H6T3 665 aaPredicted RBP17.01■□□□□ 0.31
DDX41-205ENST00000505081 NR3C2P08235 984 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 FOXN2P32314 431 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 SLC1A1P43005 524 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 LIG4P49917 911 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 RPL7AP62424 266 aaKnown RBP17.01■□□□□ 0.31
DDX41-205ENST00000505081 MGAT5Q09328 741 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 BRDTQ58F21 947 aaPredicted RBP17.01■□□□□ 0.31
DDX41-205ENST00000505081 WDR44Q5JSH3 913 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 SPATA21Q7Z572 469 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 HAUS1Q96CS2 278 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 CXorf56Q9H5V9 222 aa17.01■□□□□ 0.31
DDX41-205ENST00000505081 IGF2BP3O00425 579 aaKnown RBP eCLIP17■□□□□ 0.31
DDX41-205ENST00000505081 C4BPAP04003 597 aaKnown RBP17■□□□□ 0.31
DDX41-205ENST00000505081 PRKCEQ02156 737 aa17■□□□□ 0.31
DDX41-205ENST00000505081 FASTKD3Q14CZ7 662 aaKnown RBP17■□□□□ 0.31
DDX41-205ENST00000505081 ZACNQ401N2 412 aa17■□□□□ 0.31
DDX41-205ENST00000505081 USP37Q86T82 979 aa17■□□□□ 0.31
DDX41-205ENST00000505081 KIF9Q9HAQ2 790 aa17■□□□□ 0.31
DDX41-205ENST00000505081 RNF146Q9NTX7 359 aa17■□□□□ 0.31
DDX41-205ENST00000505081 GEMIN8Q9NWZ8 242 aaKnown RBP17■□□□□ 0.31
DDX41-205ENST00000505081 TLR3O15455 904 aaKnown RBP17■□□□□ 0.31
DDX41-205ENST00000505081 SUN1O94901 812 aa17■□□□□ 0.31
DDX41-205ENST00000505081 PSMC4P43686 418 aa17■□□□□ 0.31
DDX41-205ENST00000505081 ALDH5A1P51649 535 aaPredicted RBP17■□□□□ 0.31
DDX41-205ENST00000505081 NOMO3P69849 1222 aa17■□□□□ 0.31
DDX41-205ENST00000505081 MIS18BP1Q6P0N0 1132 aa17■□□□□ 0.31
DDX41-205ENST00000505081 FAM83AQ86UY5 434 aa17■□□□□ 0.31
DDX41-205ENST00000505081 RHOT1Q8IXI2 618 aa17■□□□□ 0.31
DDX41-205ENST00000505081 SPOCK2Q92563 424 aa17■□□□□ 0.31
DDX41-205ENST00000505081 RBM15Q96T37 977 aaKnown RBP eCLIP17■□□□□ 0.313e-7■□□□□ 10.7
DDX41-205ENST00000505081 WDR81Q562E7 1941 aa17■□□□□ 0.31
DDX41-205ENST00000505081 RPSAP08865 295 aaKnown RBP17■□□□□ 0.31
DDX41-205ENST00000505081 HARSP12081 509 aaKnown RBP17■□□□□ 0.31
DDX41-205ENST00000505081 GARTP22102 1010 aa17■□□□□ 0.31
DDX41-205ENST00000505081 GNA15P30679 374 aa17■□□□□ 0.31
DDX41-205ENST00000505081 SYDE1Q6ZW31 735 aaPredicted RBP17■□□□□ 0.31
DDX41-205ENST00000505081 ENOSF1Q7L5Y1 443 aa17■□□□□ 0.31
DDX41-205ENST00000505081 VSIG10LQ86VR7 867 aa17■□□□□ 0.31
DDX41-205ENST00000505081 MAIP1Q8WWC4 291 aa17■□□□□ 0.31
DDX41-205ENST00000505081 FAM212AQ96EL1 285 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms