RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 CLIC2O15247 247 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 EXTL3O43909 919 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 ALDH2P05091 517 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 CA8P35219 290 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 WNT7BP56706 349 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 SNRPFP62306 86 aaKnown RBP18.3■□□□□ 0.52
SYNE4-207ENST00000505054 PPP2R3AQ06190 1150 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 SPAG1Q07617 926 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 KIAA1841Q6NSI8 718 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 HS2ST1Q7LGA3 356 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 TDRD5Q8NAT2 981 aaKnown RBP18.3■□□□□ 0.52
SYNE4-207ENST00000505054 C18orf25Q96B23 403 aaPredicted RBP18.3■□□□□ 0.52
SYNE4-207ENST00000505054 ZBP1Q9H171 429 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 HSPBP1Q9NZL4 362 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 MAPK8IP1Q9UQF2 711 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 TDRD15B5MCY1 1934 aaKnown RBP18.29■□□□□ 0.52
SYNE4-207ENST00000505054 KIAA0391O15091 583 aaKnown RBP18.29■□□□□ 0.52
SYNE4-207ENST00000505054 GALR2O43603 387 aaPredicted RBP18.29■□□□□ 0.52
SYNE4-207ENST00000505054 POU5F1Q01860 360 aaKnown RBP18.29■□□□□ 0.52
SYNE4-207ENST00000505054 CAMK4Q16566 473 aa18.29■□□□□ 0.52
SYNE4-207ENST00000505054 BRSK2Q8IWQ3 736 aa18.29■□□□□ 0.52
SYNE4-207ENST00000505054 C12orf56Q8IXR9 622 aa18.29■□□□□ 0.52
SYNE4-207ENST00000505054 GPD1LQ8N335 351 aa18.29■□□□□ 0.52
SYNE4-207ENST00000505054 TMEM130Q8N3G9 435 aa18.29■□□□□ 0.52
SYNE4-207ENST00000505054 GUF1Q8N442 669 aaKnown RBP18.29■□□□□ 0.52
SYNE4-207ENST00000505054 TUBGCP4Q9UGJ1 667 aa18.29■□□□□ 0.52
SYNE4-207ENST00000505054 MAN1B1Q9UKM7 699 aa18.29■□□□□ 0.52
SYNE4-207ENST00000505054 IRAK3Q9Y616 596 aa18.29■□□□□ 0.52
SYNE4-207ENST00000505054 C2orf16Q68DN1 1984 aa18.29■□□□□ 0.52
SYNE4-207ENST00000505054 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.28■□□□□ 0.52
SYNE4-207ENST00000505054 H0Y858 1186 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 GOLGA6L22H0YM25 854 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 KIF4AO95239 1232 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 EFEMP2O95967 443 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 LDHAP00338 332 aaKnown RBP18.28■□□□□ 0.52
SYNE4-207ENST00000505054 NFICP08651 508 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 IGFBP6P24592 240 aaPredicted RBP18.28■□□□□ 0.52
SYNE4-207ENST00000505054 CYP2J2P51589 502 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 HSP90AA2PQ14568 343 aaPredicted RBP18.28■□□□□ 0.52
SYNE4-207ENST00000505054 ZBTB6Q15916 424 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 RARS2Q5T160 578 aaKnown RBP18.28■□□□□ 0.52
SYNE4-207ENST00000505054 ZNF658Q5TYW1 1059 aaPredicted RBP18.28■□□□□ 0.52
SYNE4-207ENST00000505054 JADE1Q6IE81 842 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 DDX53Q86TM3 631 aaKnown RBP18.28■□□□□ 0.52
SYNE4-207ENST00000505054 CBWD2Q8IUF1 395 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 VPS52Q8N1B4 723 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 GPT2Q8TD30 523 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 FAM212AQ96EL1 285 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 KIF12Q96FN5 646 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 CLSTN2Q9H4D0 955 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 SLC38A7Q9NVC3 462 aa18.28■□□□□ 0.52
SYNE4-207ENST00000505054 RBAKQ9NYW8 714 aaPredicted RBP18.28■□□□□ 0.52
SYNE4-207ENST00000505054 CGNQ9P2M7 1197 aaKnown RBP18.28■□□□□ 0.52
SYNE4-207ENST00000505054 CITO14578 2027 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 PDXKO00764 312 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 KIF20AO95235 890 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 CXCL14O95715 111 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 BMP6P22004 513 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 CLCNKBP51801 687 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 COBLL1Q53SF7 1204 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 ISM2Q6H9L7 571 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 CD300LGQ6UXG3 332 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 CD302Q8IX05 232 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 RNF168Q8IYW5 571 aaPredicted RBP18.27■□□□□ 0.52
SYNE4-207ENST00000505054 C3orf58Q8NDZ4 430 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 GOLGA5Q8TBA6 731 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 NOC3LQ8WTT2 800 aaKnown RBP18.27■□□□□ 0.52
SYNE4-207ENST00000505054 UROC1Q96N76 676 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 COLEC11Q9BWP8 271 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 ASB7Q9H672 318 aa18.27■□□□□ 0.52
SYNE4-207ENST00000505054 MYO15AQ9UKN7 3530 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 PROB1E7EW31 1015 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 IL18RAPO95256 599 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 CTSAP10619 480 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 PRCPP42785 496 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 GUCY2FP51841 1108 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 MORC3Q14149 939 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 TMEM132DQ14C87 1099 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 UPP1Q16831 310 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 ZCWPW2Q504Y3 356 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 EFCAB13Q8IY85 973 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 PLCD3Q8N3E9 789 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 TMEM105Q8N8V8 129 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 XXYLT1Q8NBI6 393 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 HASPINQ8TF76 798 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 TMEM174Q8WUU8 243 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 TSPAN18Q96SJ8 248 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 DMAC2Q9NW81 257 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 ADAM28Q9UKQ2 775 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 UBQLN1Q9UMX0 589 aaKnown RBP18.26■□□□□ 0.51
SYNE4-207ENST00000505054 TRAF3IP3Q9Y228 551 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 USTQ9Y2C2 406 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 DERAQ9Y315 318 aa18.26■□□□□ 0.51
SYNE4-207ENST00000505054 PDCD11Q14690 1871 aaKnown RBP18.26■□□□□ 0.51
SYNE4-207ENST00000505054 ZFHX2Q9C0A1 2572 aaPredicted RBP18.26■□□□□ 0.51
SYNE4-207ENST00000505054 TRIP11Q15643 1979 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 TMEM189-UBE2V1I3L0A0 370 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 BIN1O00499 593 aa18.25■□□□□ 0.51
SYNE4-207ENST00000505054 PODXLO00592 558 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms