RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 INTUQ9ULD6 942 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 PADI3Q9ULW8 664 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 PCDHB2Q9Y5E7 798 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 FRMPD3Q5JV73 1810 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 A0A0U1RQF3 1178 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 KIF5CO60282 957 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 LRRN2O75325 713 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 EOMESO95936 686 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 CST3P01034 146 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 KRT19P08727 400 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 FAM163BP0C2L3 166 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 HSPA1AP0DMV8 641 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 HSPA1BP0DMV9 641 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 TNFAIP3P21580 790 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 CD52P31358 61 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 USP8P40818 1118 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 VAV2P52735 878 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 LBX1P52954 281 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 MYL6P60660 151 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 ARID5AQ03989 594 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 DSC3Q14574 896 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 MTF1Q14872 753 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 ZBTB6Q15916 424 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 SLC39A5Q6ZMH5 540 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 LRRC8DQ7L1W4 858 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 REXO1L1PQ8IX06 675 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 SMG8Q8ND04 991 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 TATDN2Q93075 761 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 KREMEN1Q96MU8 473 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 PI4K2AQ9BTU6 479 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 TMEM106CQ9BVX2 250 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 XYLT2Q9H1B5 865 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 TRPV6Q9H1D0 765 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 AGO3Q9H9G7 860 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 ADAMTS1Q9UHI8 967 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 CNTN6Q9UQ52 1028 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 PCDHA13Q9Y5I0 950 aa8.72□□□□□ -1.01
TOPBP1-202ENST00000503338 SMIM28A0A1B0GU29 152 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 BTNL10A8MVZ5 291 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 ITGB3P05106 788 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 THP07101 528 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 PLEKP08567 350 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 GZMAP12544 262 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 KRT5P13647 590 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 TNNT1P13805 278 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 LRPAP1P30533 357 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 POLR2BP30876 1174 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 MAGEA1P43355 309 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 TNNC1P63316 161 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 NAB2Q15742 525 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 IFI16Q16666 785 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 WDR72Q3MJ13 1102 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 ALKBH5Q6P6C2 394 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 TRIM72Q6ZMU5 477 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 NYAP1Q6ZVC0 841 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 SLC24A5Q71RS6 500 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 ZNF571Q7Z3V5 609 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 RNF10Q8N5U6 811 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 ACRBPQ8NEB7 543 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 KIF18AQ8NI77 898 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 UBE2Q2Q8WVN8 375 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 HPDLQ96IR7 371 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 AGPAT1Q99943 283 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 ADAM2Q99965 735 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 DESI2Q9BSY9 194 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 APOL6Q9BWW8 343 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 BCO2Q9BYV7 579 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 APOBEC3GQ9HC16 384 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 RGS18Q9NS28 235 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 SIX4Q9UIU6 781 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 NAGPAQ9UK23 515 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 AJAP1Q9UKB5 411 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 AGAP1Q9UPQ3 857 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 NUB1Q9Y5A7 615 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 PCDHB4Q9Y5E5 795 aa8.71□□□□□ -1.02
TOPBP1-202ENST00000503338 CITO14578 2027 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 ANO9A1A5B4 782 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 ARHGEF37A1IGU5 675 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 INPPL1O15357 1258 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 MEFVO15553 781 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 PJA2O43164 708 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 CYP26A1O43174 497 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 MED7O43513 233 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 PAEPP09466 180 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 CYP11B1P15538 503 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 AKAP5P24588 427 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 RPL9P32969 192 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 RFC2P35250 354 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 ETF1P62495 437 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 CDR2Q01850 454 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 GFPT1Q06210 699 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 SV2CQ496J9 727 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 CCDC122Q5T0U0 273 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 C9orf57Q5W0N0 161 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 SPOPLQ6IQ16 392 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 TRAF7Q6Q0C0 670 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 TMEM270Q6UE05 265 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 DPH6Q7L8W6 267 aa8.7□□□□□ -1.02
TOPBP1-202ENST00000503338 ECHDC2Q86YB7 292 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms