RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
SMC4-227ENST00000497984 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.42□□□□□ -1.54
SMC4-227ENST00000497984 AFAP1L2Q8N4X5 818 aa5.42□□□□□ -1.54
SMC4-227ENST00000497984 TBC1D15Q8TC07 691 aa5.42□□□□□ -1.54
SMC4-227ENST00000497984 SCARB1Q8WTV0 552 aa5.42□□□□□ -1.54
SMC4-227ENST00000497984 C1QTNF7Q9BXJ2 289 aa5.42□□□□□ -1.54
SMC4-227ENST00000497984 CAAP1Q9H8G2 361 aa5.42□□□□□ -1.54
SMC4-227ENST00000497984 DNAJC28Q9NX36 388 aa5.42□□□□□ -1.54
SMC4-227ENST00000497984 TBX22Q9Y458 520 aa5.42□□□□□ -1.54
SMC4-227ENST00000497984 A0A1W2PS29 197 aa5.41□□□□□ -1.54
SMC4-227ENST00000497984 ELFN1P0C7U0 828 aa5.41□□□□□ -1.54
SMC4-227ENST00000497984 DDCP20711 480 aa5.41□□□□□ -1.54
SMC4-227ENST00000497984 MAPK10P53779 464 aa5.41□□□□□ -1.54
SMC4-227ENST00000497984 SRSF4Q08170 494 aaKnown RBP5.41□□□□□ -1.54
SMC4-227ENST00000497984 STAT4Q14765 748 aa5.41□□□□□ -1.54
SMC4-227ENST00000497984 AKNAD1Q5T1N1 836 aa5.41□□□□□ -1.54
SMC4-227ENST00000497984 MICALCLQ6ZW33 695 aa5.41□□□□□ -1.54
SMC4-227ENST00000497984 GRASPQ7Z6J2 395 aaPredicted RBP5.41□□□□□ -1.54
SMC4-227ENST00000497984 PEG10Q86TG7 708 aaKnown RBP5.41□□□□□ -1.54
SMC4-227ENST00000497984 DCBLD1Q8N8Z6 715 aa5.41□□□□□ -1.54
SMC4-227ENST00000497984 SMG7Q92540 1137 aaKnown RBP5.41□□□□□ -1.54
SMC4-227ENST00000497984 SARAFQ96BY9 339 aa5.41□□□□□ -1.54
SMC4-227ENST00000497984 KIAA0391O15091 583 aaKnown RBP5.4□□□□□ -1.54
SMC4-227ENST00000497984 MPPED1O15442 326 aa5.4□□□□□ -1.54
SMC4-227ENST00000497984 EYA4O95677 639 aa5.4□□□□□ -1.54
SMC4-227ENST00000497984 KRTAP5-11Q6L8G4 156 aa5.4□□□□□ -1.54
SMC4-227ENST00000497984 LHFPL2Q6ZUX7 228 aa5.4□□□□□ -1.54
SMC4-227ENST00000497984 TLR10Q9BXR5 811 aa5.4□□□□□ -1.54
SMC4-227ENST00000497984 MANSC1Q9H8J5 431 aa5.4□□□□□ -1.54
SMC4-227ENST00000497984 MYBBP1AQ9BQG0 1328 aaKnown RBP5.4□□□□□ -1.55
SMC4-227ENST00000497984 PRAMEF33A0A0G2JMD5 474 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 PRAMEF10O60809 474 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 PRKD3O94806 890 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 HAUS5O94927 633 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 GATA3P23771 443 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 SOX5P35711 763 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 TMPRSS15P98073 1019 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 FAPQ12884 760 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 KAZNQ674X7 775 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 TFAP2BQ92481 460 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 DPF1Q92782 380 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 TMEM125Q96AQ2 219 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 AHCYL2Q96HN2 611 aaKnown RBP5.39□□□□□ -1.55
SMC4-227ENST00000497984 ZNF778Q96MU6 729 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 SLC29A3Q9BZD2 475 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 C11orf54Q9H0W9 315 aaPredicted RBP5.39□□□□□ -1.55
SMC4-227ENST00000497984 CPNE5Q9HCH3 593 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 INTS13Q9NVM9 706 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 CTTNBP2NLQ9P2B4 639 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 DNM3Q9UQ16 869 aa5.39□□□□□ -1.55
SMC4-227ENST00000497984 CCDC151A5D8V7 595 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 KCNA2P16389 499 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 GRIA3P42263 894 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 ZNF81P51508 661 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 CTXN1P60606 82 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 ERVK-21P61565 698 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 NBPF8Q3BBV2 869 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 PTF1AQ7RTS3 328 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 NLGN4YQ8NFZ3 816 aaPredicted RBP5.38□□□□□ -1.55
SMC4-227ENST00000497984 SLC30A5Q8TAD4 765 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 LPIN2Q92539 896 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 SLC2A13Q96QE2 648 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 ZNF277Q9NRM2 450 aaPredicted RBP5.38□□□□□ -1.55
SMC4-227ENST00000497984 GPR45Q9Y5Y3 372 aa5.38□□□□□ -1.55
SMC4-227ENST00000497984 SBK3P0C264 359 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 AGXTP21549 392 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 GPD1P21695 349 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 ITPKBP27987 946 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 CREMQ03060 361 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 TAF7LQ5H9L4 462 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 TSHZ1Q6ZSZ6 1077 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 BHLHA9Q7RTU4 235 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 CLNKQ7Z7G1 428 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 CHAC2Q8WUX2 184 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 DPF2Q92785 391 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 FBXL20Q96IG2 436 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 C7orf25Q9BPX7 421 aa5.37□□□□□ -1.55
SMC4-227ENST00000497984 MANSC4A6NHS7 340 aaPredicted RBP5.36□□□□□ -1.55
SMC4-227ENST00000497984 ADM5C9JUS6 153 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 ORC4O43929 436 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 AGFG2O95081 481 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 WASP42768 502 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 RPS7P62081 194 aaKnown RBP5.36□□□□□ -1.55
SMC4-227ENST00000497984 TARDBPQ13148 414 aaKnown RBP eCLIP5.36□□□□□ -1.55
SMC4-227ENST00000497984 PTPRRQ15256 657 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 TXNRD1Q16881 649 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 CD300EQ496F6 205 aaPredicted RBP5.36□□□□□ -1.55
SMC4-227ENST00000497984 TSTD2Q5T7W7 516 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 HASPINQ8TF76 798 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 NRG4Q8WWG1 115 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 DDB2Q92466 427 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 ZNF70Q9UC06 446 aaPredicted RBP5.36□□□□□ -1.55
SMC4-227ENST00000497984 ADAM21Q9UKJ8 722 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 CDYLQ9Y232 598 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 AOX1Q06278 1338 aa5.36□□□□□ -1.55
SMC4-227ENST00000497984 WDR27A2RRH5 827 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 GRM6O15303 877 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 GPR39O43194 453 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 SUN1O94901 812 aa5.35□□□□□ -1.55
SMC4-227ENST00000497984 CELA2AP08217 269 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms