RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 ZHX3Q9H4I2 956 aa14.4□□□□□ -0.1
PHGDH-207ENST00000496756 RTN4Q9NQC3 1192 aaKnown RBP14.4□□□□□ -0.1
PHGDH-207ENST00000496756 FAM105AQ9NUU6 356 aa14.4□□□□□ -0.1
PHGDH-207ENST00000496756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.4□□□□□ -0.1
PHGDH-207ENST00000496756 DLGAP2Q9P1A6 1054 aa14.4□□□□□ -0.1
PHGDH-207ENST00000496756 LARSQ9P2J5 1176 aaKnown RBP14.4□□□□□ -0.1
PHGDH-207ENST00000496756 KANSL3Q9P2N6 904 aa14.4□□□□□ -0.1
PHGDH-207ENST00000496756 DNAJB4Q9UDY4 337 aa14.4□□□□□ -0.1
PHGDH-207ENST00000496756 PIN4Q9Y237 131 aaKnown RBP14.4□□□□□ -0.1
PHGDH-207ENST00000496756 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
PHGDH-207ENST00000496756 A0A1W2PQC6 194 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 PDXKO00764 312 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 CALUO43852 315 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-207ENST00000496756 CSDE1O75534 798 aaKnown RBP14.39□□□□□ -0.11
PHGDH-207ENST00000496756 URODP06132 367 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 RPL13P26373 211 aaKnown RBP14.39□□□□□ -0.11
PHGDH-207ENST00000496756 YWHABP31946 246 aaKnown RBP14.39□□□□□ -0.11
PHGDH-207ENST00000496756 COPB1P53618 953 aaKnown RBP14.39□□□□□ -0.11
PHGDH-207ENST00000496756 PRKCEQ02156 737 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 PPP2R3AQ06190 1150 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 KRT31Q15323 416 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 ANKRD40Q6AI12 368 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 DCLRE1AQ6PJP8 1040 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 PADI6Q6TGC4 694 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 LRRC8AQ8IWT6 810 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 PIGOQ8TEQ8 1089 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 NAP1L5Q96NT1 182 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-207ENST00000496756 DUSP9Q99956 384 aaKnown RBP14.39□□□□□ -0.11
PHGDH-207ENST00000496756 TMEM175Q9BSA9 504 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 C17orf75Q9HAS0 396 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 SLC2A4RGQ9NR83 387 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 CGNQ9P2M7 1197 aaKnown RBP14.39□□□□□ -0.11
PHGDH-207ENST00000496756 FAN1Q9Y2M0 1017 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 CACNA1IQ9P0X4 2223 aa14.39□□□□□ -0.11
PHGDH-207ENST00000496756 SPTLC1O15269 473 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 INPPL1O15357 1258 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 ZNF862O60290 1169 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 GLUD1P00367 558 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 SOD2P04179 222 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 CLCN1P35523 988 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 RARRES1P49788 294 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 SNRPFP62306 86 aaKnown RBP14.38□□□□□ -0.11
PHGDH-207ENST00000496756 KNOP1Q1ED39 458 aaKnown RBP14.38□□□□□ -0.11
PHGDH-207ENST00000496756 ZNF528Q3MIS6 628 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 FKBP15Q5T1M5 1219 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 EPM2AIP1Q7L775 607 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-207ENST00000496756 APTXQ7Z2E3 356 aaKnown RBP14.38□□□□□ -0.11
PHGDH-207ENST00000496756 ZNF410Q86VK4 478 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 ZNF280BQ86YH2 543 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 EXOC8Q8IYI6 725 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 MYCT1Q8N699 235 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 PJA1Q8NG27 643 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 ZNF507Q8TCN5 953 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 HDAC7Q8WUI4 952 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 SMG7Q92540 1137 aaKnown RBP14.38□□□□□ -0.11
PHGDH-207ENST00000496756 SECISBP2LQ93073 1101 aaKnown RBP14.38□□□□□ -0.11
PHGDH-207ENST00000496756 CCDC51Q96ER9 411 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 RPS6KC1Q96S38 1066 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 MYADMQ96S97 322 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 RUSC1Q9BVN2 902 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 MRPL44Q9H9J2 332 aaKnown RBP14.38□□□□□ -0.11
PHGDH-207ENST00000496756 NCDNQ9UBB6 729 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 TRAF3IP3Q9Y228 551 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 WDR81Q562E7 1941 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 SPTBN2O15020 2390 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 GPR179Q6PRD1 2367 aa14.38□□□□□ -0.11
PHGDH-207ENST00000496756 TRIM49BA6NDI0 452 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 LGALS16A8MUM7 142 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 H0YCG3 227 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 C2CD2LO14523 706 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 CETN3O15182 167 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 CCP110O43303 1012 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 C1RP00736 705 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 LAMP2P13473 410 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 MTIF2P46199 727 aaKnown RBP14.37□□□□□ -0.11
PHGDH-207ENST00000496756 STARD6P59095 220 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 NFIL3Q16649 462 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 ZCWPW2Q504Y3 356 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 XKR3Q5GH77 459 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 VARS2Q5ST30 1063 aaKnown RBP14.37□□□□□ -0.11
PHGDH-207ENST00000496756 KIAA0319Q5VV43 1072 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 CATSPER4Q7RTX7 472 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 SFR1Q86XK3 245 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 CNGA4Q8IV77 575 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 MCPH1Q8NEM0 835 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 HVCN1Q96D96 273 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 CNOT6LQ96LI5 555 aaKnown RBP14.37□□□□□ -0.11
PHGDH-207ENST00000496756 TUBGCP2Q9BSJ2 902 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 NUP58Q9BVL2 599 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 PLEKHA4Q9H4M7 779 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 PIDD1Q9HB75 910 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 FBXO4Q9UKT5 387 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 ZFP37Q9Y6Q3 630 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-207ENST00000496756 CNTNAP2Q9UHC6 1331 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 DOCK8Q8NF50 2099 aa14.37□□□□□ -0.11
PHGDH-207ENST00000496756 A0A087WZ62 844 aa14.36□□□□□ -0.11
PHGDH-207ENST00000496756 MEIS3P2A8K0S8 358 aa14.36□□□□□ -0.11
PHGDH-207ENST00000496756 PRR5-ARHGAP8B1AHC4 643 aa14.36□□□□□ -0.11
PHGDH-207ENST00000496756 ANHXE9PGG2 379 aa14.36□□□□□ -0.11
PHGDH-207ENST00000496756 NRP1O14786 923 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms