RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 FGD4Q96M96 766 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 PPP1R16BQ96T49 567 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 PTPN18Q99952 460 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 NHEJ1Q9H9Q4 299 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 OLFML3Q9NRN5 406 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 ARMCX3Q9UH62 379 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 TBK1Q9UHD2 729 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 AGTPBP1Q9UPW5 1226 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 TRAF3IP3Q9Y228 551 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 EPN1Q9Y6I3 576 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 TRPM7Q96QT4 1865 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 ITIH6Q6UXX5 1313 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 A0A1W2PQC6 194 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 IQCA1LA6NCM1 817 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 SPATA31C2B4DYI2 1134 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 BTBD19C9JJ37 291 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 PDHXO00330 501 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 NDUFA10O95299 355 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CYP1A2P05177 515 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 GDF10P55107 478 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 TBX4P57082 545 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CORO7P57737 925 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 PRKCEQ02156 737 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 GFPT1Q06210 699 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 PTPROQ16827 1216 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 SEZ6Q53EL9 994 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 LDLRAD1Q5T700 205 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CST9Q5W186 159 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 SCARA3Q6AZY7 606 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CACNA2D4Q7Z3S7 1137 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CYP2U1Q7Z449 544 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 HAUS6Q7Z4H7 955 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 RIOX2Q8IUF8 465 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 FAM133AQ8N9E0 248 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 TPCN2Q8NHX9 752 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 TRAPPC12Q8WVT3 735 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 SLC35C1Q96A29 364 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 ERGIC2Q96RQ1 377 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 DNAJC7Q99615 494 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 SH3GL1Q99961 368 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CORO1BQ9BR76 489 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 LSM14BQ9BX40 385 aaKnown RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 TRIM4Q9C037 500 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 GBP3Q9H0R5 595 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 XPNPEP1Q9NQW7 623 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 AGPAT3Q9NRZ7 376 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 LARSQ9P2J5 1176 aaKnown RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CDH23Q9H251 3354 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 MACROD2A1Z1Q3 448 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ANKRD63C9JTQ0 380 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 PDXKO00764 312 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 EXOC3O60645 756 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 STBD1O95210 358 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 GGPS1O95749 300 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 XRCC5P13010 732 aaKnown RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ADSSP30520 456 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 NPTX2P47972 431 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 KRT76Q01546 638 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 GPS2Q13227 327 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 RAPGEF1Q13905 1077 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ZNF569Q5MCW4 686 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ABHD15Q6UXT9 468 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CYP26C1Q6V0L0 522 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CDR2LQ86X02 465 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 C4orf19Q8IY42 314 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 BRI3BPQ8WY22 251 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CCDC127Q96BQ5 260 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 GPRASP2Q96D09 838 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 PCYT2Q99447 389 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 BRD8Q9H0E9 1235 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 SUGCTQ9HAC7 445 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ACP6Q9NPH0 428 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 TYW1Q9NV66 732 aaKnown RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 DNAAF2Q9NVR5 837 aaKnown RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 KCNH4Q9UQ05 1017 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 RLFQ13129 1914 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CCL15-CCL14A0A0B4J2E2 113 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 DENND3A2RUS2 1198 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ENO4A6NNW6 628 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CXCL11O14625 94 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 FARP2O94887 1054 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 HNRNPH1P31943 449 aaKnown RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ARHGAP25P42331 645 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CENPCQ03188 943 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 PPIL2Q13356 520 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CCL15Q16663 113 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 EML3Q32P44 896 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ARHGAP29Q52LW3 1261 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 TDRD12Q587J7 1177 aaKnown RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CCSAPQ6IQ19 270 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 NIPA1Q7RTP0 329 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 NT5DC4Q86YG4 428 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CBWD2Q8IUF1 395 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 TMTC1Q8IUR5 882 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 LILRB2Q8N423 598 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 LRRC71Q8N4P6 559 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CHST13Q8NET6 341 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ZNF397Q8NF99 534 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 PLEKHO2Q8TD55 490 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms