RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 LVRNQ6Q4G3 990 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 CRLF3Q8IUI8 442 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 SLC25A41Q8N5S1 370 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 ALLCQ8N6M5 410 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 JDP2Q8WYK2 163 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 RMDN1Q96DB5 314 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 CYP4F11Q9HBI6 524 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 RIC8AQ9NPQ8 531 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 ATPIF1Q9UII2 106 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 ACTL7BQ9Y614 415 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 CCDC61Q9Y6R9 512 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 PREX1Q8TCU6 1659 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 MROH1Q8NDA8 1641 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 A2ML1A8K2U0 1454 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 ARHGEF9O43307 516 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 SLC5A3P53794 718 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 DRG2P55039 364 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 RASA2Q15283 850 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 LGSNQ5TDP6 509 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 ARL6IP4Q66PJ3 421 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 TWF2Q6IBS0 349 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 SIX6OS1Q8N1H7 587 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 TTC17Q96AE7 1141 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 DACT3Q96B18 629 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 SNF8Q96H20 258 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 RNF26Q9BY78 433 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 GOLPH3Q9H4A6 298 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 APOBEC2Q9Y235 224 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 TTLL3Q9Y4R7 772 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 LMTK2Q8IWU2 1503 aa8.61□□□□□ -1.03
CRNKL1-205ENST00000496549 USP32Q8NFA0 1604 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 GOLGA8IPA6NC78 632 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 MAGEC1O60732 1142 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 FYNP06241 537 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 FOSL1P15407 271 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 ITIH2P19823 946 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 CTNNA2P26232 953 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 HOXA7P31268 230 aaPredicted RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 TTKP33981 857 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 PIK3CAP42336 1068 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 OVGP1Q12889 678 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 MDH1BQ5I0G3 518 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 ANKRD40Q6AI12 368 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 C14orf80Q86SX3 495 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 TTC5Q8N0Z6 440 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 C4orf33Q8N1A6 199 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 FLCNQ8NFG4 579 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 ACMSDQ8TDX5 336 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 PYDC1Q8WXC3 89 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 RAPGEF4Q8WZA2 1011 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 RNF25Q96BH1 459 aaPredicted RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 CLIP3Q96DZ5 547 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 C1orf50Q9BV19 199 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 NOL6Q9H6R4 1146 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 TAGLN3Q9UI15 199 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 HPS5Q9UPZ3 1129 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 SUGT1Q9Y2Z0 365 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 KANSL1LA0AUZ9 987 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 ZNF263O14978 683 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 EDF1O60869 148 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 RNASEH1O60930 286 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 OAS1P00973 400 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 MT-ND3P03897 115 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 TXKP42681 527 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 ENTPD1P49961 510 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 POTEHQ6S545 545 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 NOP9Q86U38 636 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 TTC30AQ86WT1 665 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 ALDH16A1Q8IZ83 802 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 CENPSQ8N2Z9 138 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 FBXL16Q8N461 479 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 NGDNQ8NEJ9 315 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 PPP4R1Q8TF05 950 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 TAMM41Q96BW9 452 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 MED15Q96RN5 788 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 UNKQ9C0B0 810 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 SPC25Q9HBM1 224 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 C12orf4Q9NQ89 552 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 DDX43Q9NXZ2 648 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 COL3A1P02461 1466 aaPredicted RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 PLEKHG1Q9ULL1 1385 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 TRAFD1O14545 582 aaPredicted RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 IDH3BO43837 385 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 USP1O94782 785 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 RHOBTB3O94955 611 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 NLRP6P59044 892 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 ARHGEF6Q15052 776 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 EXOC3L4Q17RC7 722 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 ZNF829Q3KNS6 432 aaPredicted RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 DUS1LQ6P1R4 473 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 FASTKD5Q7L8L6 764 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 PRPF39Q86UA1 669 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 PALB2Q86YC2 1186 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 SPERTQ8NA61 448 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 FANCBQ8NB91 859 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 GALNT6Q8NCL4 622 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 TOR1AIP2Q8NFQ8 470 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 TPCN2Q8NHX9 752 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms