RNA–Protein interactions for RNA: ENST00000495546.1

C2orf88-209, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 387 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-209ENST00000495546 NSUN3Q9H649 340 aaKnown RBP16.68■□□□□ 0.26
C2orf88-209ENST00000495546 SIX4Q9UIU6 781 aa16.68■□□□□ 0.26
C2orf88-209ENST00000495546 ITGA11Q9UKX5 1188 aa16.68■□□□□ 0.26
C2orf88-209ENST00000495546 REV3LO60673 3130 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 C2orf71A6NGG8 1288 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 LRRIQ3A6PVS8 624 aaPredicted RBP16.67■□□□□ 0.26
C2orf88-209ENST00000495546 HIDE1A8MVS5 230 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 SLC16A3O15427 465 aaKnown RBP16.67■□□□□ 0.26
C2orf88-209ENST00000495546 DLATP10515 647 aaKnown RBP16.67■□□□□ 0.26
C2orf88-209ENST00000495546 FGFR3P22607 806 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 LILRA4P59901 499 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 DLG4P78352 724 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
C2orf88-209ENST00000495546 DUOXA2Q1HG44 320 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 USP41Q3LFD5 358 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 RTP2Q5QGT7 225 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.67■□□□□ 0.26
C2orf88-209ENST00000495546 INTS8Q75QN2 995 aaKnown RBP16.67■□□□□ 0.26
C2orf88-209ENST00000495546 TMC7Q7Z402 723 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 ADGRD2Q7Z7M1 963 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 FAM186BQ8IYM0 893 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 MRPL43Q8N983 215 aaKnown RBP16.67■□□□□ 0.26
C2orf88-209ENST00000495546 EEF2KMTQ96G04 330 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 SUSD3Q96L08 255 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 ENTPD7Q9NQZ7 604 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 RWDD2AQ9UIY3 292 aa16.67■□□□□ 0.26
C2orf88-209ENST00000495546 M0QZQ0 153 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 IKBKBO14920 756 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 SPTLC1O15269 473 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 TRAPPC3O43617 180 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 ITGB3P05106 788 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 TMEM191BP0C7N4 346 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 PAX3P23760 479 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 GLUD2P49448 558 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 STX17P56962 302 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 BFSP1Q12934 665 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 COL19A1Q14993 1142 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 TCEAL5Q5H9L2 206 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 PLPP4Q5VZY2 271 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
C2orf88-209ENST00000495546 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 FILIP1Q7Z7B0 1213 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 LRRC52Q8N7C0 313 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 AUTS2Q8WXX7 1259 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 ANKRD36BP1Q96IX9 119 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 B3GALT6Q96L58 329 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 RXFP1Q9HBX9 757 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 VWA8A3KMH1 1905 aa16.66■□□□□ 0.26
C2orf88-209ENST00000495546 I3L4J1 428 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 SYN3O14994 580 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 CSPG5O95196 566 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 CXCL14O95715 111 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 TNNC2P02585 160 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 URODP06132 367 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 EPB41P11171 864 aaKnown RBP16.65■□□□□ 0.26
C2orf88-209ENST00000495546 TNNI1P19237 187 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 ERCC5P28715 1186 aaPredicted RBP16.65■□□□□ 0.26
C2orf88-209ENST00000495546 POLR2BP30876 1174 aaKnown RBP16.65■□□□□ 0.26
C2orf88-209ENST00000495546 VAMP7P51809 220 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 AP3M2P53677 418 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 CT47A1Q5JQC4 288 aaPredicted RBP16.65■□□□□ 0.26
C2orf88-209ENST00000495546 FAM171A1Q5VUB5 890 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 C15orf39Q6ZRI6 1047 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 CSGALNACT2Q8N6G5 542 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 MICAL1Q8TDZ2 1067 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 PIK3R5Q8WYR1 880 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 TTPALQ9BTX7 342 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 MRPL17Q9NRX2 175 aaKnown RBP16.65■□□□□ 0.26
C2orf88-209ENST00000495546 NUB1Q9Y5A7 615 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 SCN1AP35498 2009 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 EYSQ5T1H1 3165 aa16.65■□□□□ 0.26
C2orf88-209ENST00000495546 C4BPAP04003 597 aaKnown RBP16.64■□□□□ 0.25
C2orf88-209ENST00000495546 TKTP29401 623 aaKnown RBP16.64■□□□□ 0.25
C2orf88-209ENST00000495546 PNPLA4P41247 253 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 TAF6P49848 677 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 RBP5P82980 135 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 HYAL1Q12794 435 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 MRPL58Q14197 206 aaKnown RBP16.64■□□□□ 0.25
C2orf88-209ENST00000495546 BMS1Q14692 1282 aaKnown RBP16.64■□□□□ 0.25
C2orf88-209ENST00000495546 DUSP6Q16828 381 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 ZACNQ401N2 412 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 TDRD10Q5VZ19 366 aaKnown RBP16.64■□□□□ 0.25
C2orf88-209ENST00000495546 USP37Q86T82 979 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 MAFAQ8NHW3 353 aaPredicted RBP16.64■□□□□ 0.25
C2orf88-209ENST00000495546 LNX1Q8TBB1 728 aaPredicted RBP16.64■□□□□ 0.25
C2orf88-209ENST00000495546 SYAP1Q96A49 352 aaPredicted RBP16.64■□□□□ 0.25
C2orf88-209ENST00000495546 ZNF560Q96MR9 790 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 DACH1Q9UI36 760 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 PCDHB8Q9UN66 801 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 AGAP1Q9UPQ3 857 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 SSX2IPQ9Y2D8 614 aa16.64■□□□□ 0.25
C2orf88-209ENST00000495546 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.63■□□□□ 0.25
C2orf88-209ENST00000495546 CST3P01034 146 aaPredicted RBP16.63■□□□□ 0.25
C2orf88-209ENST00000495546 CNPP09543 421 aaKnown RBP16.63■□□□□ 0.25
C2orf88-209ENST00000495546 TRIM49P0CI25 452 aa16.63■□□□□ 0.25
C2orf88-209ENST00000495546 TRIM49CP0CI26 452 aa16.63■□□□□ 0.25
C2orf88-209ENST00000495546 KRT13P13646 458 aa16.63■□□□□ 0.25
C2orf88-209ENST00000495546 MARSP56192 900 aaKnown RBP16.63■□□□□ 0.25
C2orf88-209ENST00000495546 PPP3CAQ08209 521 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms