RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 PSEN2P49810 448 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 CPT1AP50416 773 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 TMEM62Q0P6H9 643 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 C1orf127Q8N9H9 656 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 USP38Q8NB14 1042 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 ACTRT1Q8TDG2 376 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 LRRC1Q9BTT6 524 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 ARFGAP3Q9NP61 516 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 TMEM59LQ9UK28 342 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 ERLIN2O94905 339 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 GNA15P30679 374 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 ASPAP45381 313 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 TRPC3Q13507 836 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 BEND6Q5SZJ8 279 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-225ENST00000494465 JADE1Q6IE81 842 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 ZNF653Q96CK0 615 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 ABT1Q9ULW3 272 aaKnown RBP17.68■□□□□ 0.42
ATG4B-225ENST00000494465 ALG6Q9Y672 507 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 TBC1D8O95759 1140 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 HOXA11P31270 313 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-225ENST00000494465 RNASE9P60153 205 aaKnown RBP17.68■□□□□ 0.42
ATG4B-225ENST00000494465 CENPCQ03188 943 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 LONRF2Q1L5Z9 754 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 DCAF12L1Q5VU92 463 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 RASGEF1CQ8N431 466 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 HDAC7Q8WUI4 952 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 CPA5Q8WXQ8 436 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 NUP85Q9BW27 656 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 ARHGAP39Q9C0H5 1083 aa17.68■□□□□ 0.42
ATG4B-225ENST00000494465 CYP2C9P11712 490 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 ZNF699Q32M78 642 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 MCOLN2Q8IZK6 566 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 CYFIP2Q96F07 1278 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 AP5M1Q9H0R1 490 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 ASB7Q9H672 318 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 CISHQ9NSE2 258 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 RALGAPA2Q2PPJ7 1873 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 CEP104O60308 925 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 SASH3O75995 380 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 CLSTN1O94985 981 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 MYL3P08590 195 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 KYAT1Q16773 422 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 ZNF564Q8TBZ8 553 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-225ENST00000494465 HHIPL1Q96JK4 782 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 UVRAGQ9P2Y5 699 aa17.67■□□□□ 0.42
ATG4B-225ENST00000494465 DMGDHQ9UI17 866 aaKnown RBP17.67■□□□□ 0.42
ATG4B-225ENST00000494465 NOMO3P69849 1222 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 ZNF200P98182 395 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-225ENST00000494465 FSCN1Q16658 493 aaKnown RBP17.66■□□□□ 0.42
ATG4B-225ENST00000494465 NAA35Q5VZE5 725 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 FUT8Q9BYC5 575 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 CNOT8Q9UFF9 292 aaKnown RBP17.66■□□□□ 0.42
ATG4B-225ENST00000494465 GINS2Q9Y248 185 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 MROH7Q68CQ1 1323 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 MYADML2A6NDP7 307 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 SPDYE4A6NLX3 237 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 TREHO43280 583 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 ZMYND10O75800 440 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 WEE2P0C1S8 567 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 HOXC8P31273 242 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 SSTR3P32745 418 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-225ENST00000494465 MRPS25P82663 173 aaKnown RBP17.66■□□□□ 0.42
ATG4B-225ENST00000494465 PURAQ00577 322 aaKnown RBP17.66■□□□□ 0.42
ATG4B-225ENST00000494465 CDC42EP1Q00587 391 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 TRIM72Q6ZMU5 477 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 MON1BQ7L1V2 547 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 DNAJB3Q8WWF6 145 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 ZNF606Q8WXB4 792 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 ALG3Q92685 438 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 BTBD6Q96KE9 485 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 OSMRQ99650 979 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 ZSWIM1Q9BR11 485 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 SELENOOQ9BVL4 669 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 GCOM2Q9BZD3 368 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-225ENST00000494465 GABRQQ9UN88 632 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 POLIQ9UNA4 740 aa17.66■□□□□ 0.42
ATG4B-225ENST00000494465 THAP12O43422 761 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 AKR1A1P14550 325 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 DARSP14868 501 aaKnown RBP17.65■□□□□ 0.42
ATG4B-225ENST00000494465 CD58P19256 250 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 GRM5P41594 1212 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 MESDQ14696 234 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 PASD1Q8IV76 773 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 CD101Q93033 1021 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 RPS6KC1Q96S38 1066 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.65■□□□□ 0.426e-7■□□□□ 10.7
ATG4B-225ENST00000494465 ADPGKQ9BRR6 497 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 AVENQ9NQS1 362 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-225ENST00000494465 NOC2LQ9Y3T9 749 aaKnown RBP17.65■□□□□ 0.42
ATG4B-225ENST00000494465 KIF3CO14782 793 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 ATP8B1O43520 1251 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 ITGB3P05106 788 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 KRT19P08727 400 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 CYBAP13498 195 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 PSMC4P43686 418 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 SMYD5Q6GMV2 418 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 SCARA5Q6ZMJ2 495 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 CPNE8Q86YQ8 564 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 TRIB2Q92519 343 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 ACAP3Q96P50 834 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms