RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 ISM2Q6H9L7 571 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 RINT1Q6NUQ1 792 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 C11orf57Q6ZUT1 292 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 C1orf186Q6ZWK4 172 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 SLC7A14Q8TBB6 771 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 FAM200AQ8TCP9 573 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 SMARCE1Q969G3 411 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 CDK5RAP3Q96JB5 506 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 PRIMPOLQ96LW4 560 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 ACO2Q99798 780 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 BLZF1Q9H2G9 400 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 PIDD1Q9HB75 910 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 MAN1B1Q9UKM7 699 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 FBXL21Q9UKT6 434 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 POLIQ9UNA4 740 aa11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 MTF2Q9Y483 593 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-215ENST00000493521 PDCD11Q14690 1871 aaKnown RBP11.15□□□□□ -0.63
SOX2-OT-215ENST00000493521 NCANO14594 1321 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 WDR87Q6ZQQ6 2873 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 SHISA7A6NL88 538 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 CCDC169A6NNP5 214 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 ANHXE9PGG2 379 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 SMC2O95347 1197 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 CD72P21854 359 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 FGFR3P22607 806 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 NBL1P41271 181 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 CLCN5P51795 746 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 GUCY2FP51841 1108 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 GPC5P78333 572 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 DPYDQ12882 1025 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 CUL4BQ13620 913 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 ANGPT1Q15389 498 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 UPP1Q16831 310 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 DPCR1Q3MIW9 517 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 TMEM119Q4V9L6 283 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 ZBTB41Q5SVQ8 909 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 ALKAL1Q6UXT8 129 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 CCDC105Q8IYK2 499 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 DTWD2Q8NBA8 298 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 TCEAL4Q96EI5 215 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 KXD1Q9BQD3 176 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 C2orf40Q9H1Z8 148 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 IKZF4Q9H2S9 585 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 CUEDC2Q9H467 287 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 PLEKHA4Q9H4M7 779 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 TBC1D17Q9HA65 648 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 CBX8Q9HC52 389 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 DLGAP2Q9P1A6 1054 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 ARHGAP28Q9P2N2 729 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 TUBGCP4Q9UGJ1 667 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 CDY1Q9Y6F8 540 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 R4GN57 208 aa11.14□□□□□ -0.63
SOX2-OT-215ENST00000493521 CARNS1A5YM72 827 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 SLC26A4O43511 780 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 B3GAT3O94766 335 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 SEC24AO95486 1093 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 CAVIN2O95810 425 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 PROZP22891 400 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 FSHRP23945 695 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 TNFSF9P41273 254 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 CCR2P41597 374 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 ZNF165P49910 485 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 UVSSAQ2YD98 709 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 XKR4Q5GH76 650 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 HYIQ5T013 277 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 HAUS3Q68CZ6 603 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 LUZP1Q86V48 1076 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 HACE1Q8IYU2 909 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 ERMNQ8TAM6 284 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 SPATA20Q8TB22 786 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 FGF13Q92913 245 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 SNX27Q96L92 541 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 RHOBTB2Q9BYZ6 727 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 MAGEF1Q9HAY2 307 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 BLOC1S4Q9NUP1 217 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 KBTBD4Q9NVX7 518 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 ZDHHC7Q9NXF8 308 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 MTRRQ9UBK8 725 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 STK17AQ9UEE5 414 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 TNFSF13BQ9Y275 285 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 SSX2IPQ9Y2D8 614 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 ZMYM2Q9UBW7 1377 aa11.13□□□□□ -0.63
SOX2-OT-215ENST00000493521 WDR27A2RRH5 827 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 PROB1E7EW31 1015 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 K7ERI5 159 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 PODXLO00592 558 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 PPEF2O14830 753 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 TBC1D4O60343 1298 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 VNN2O95498 520 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 SRFP11831 508 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 CEBPBP17676 345 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 GRM5P41594 1212 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 ARPP19P56211 112 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 ROR1Q01973 937 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 RAB33AQ14088 237 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 MORC3Q14149 939 aa11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 DHX8Q14562 1220 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-215ENST00000493521 MCM6Q14566 821 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms