RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 TSPY1Q01534 308 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 HIC1Q14526 733 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 DSC3Q14574 896 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 SPA17Q15506 151 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 ENOX2Q16206 610 aaKnown RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 SLC10A6Q3KNW5 377 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 XKR4Q5GH76 650 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 EEF1DP3Q658K8 133 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 JADE1Q6IE81 842 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 PDE12Q6L8Q7 609 aaKnown RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 OTOP2Q7RTS6 562 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 TMC6Q7Z403 805 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 UNC93AQ86WB7 457 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 CDR2LQ86X02 465 aaPredicted RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 ZNF677Q86XU0 584 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 CMTR2Q8IYT2 770 aaKnown RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 GLIS3Q8NEA6 775 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 OR8K1Q8NGG5 319 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 PPP1R13LQ8WUF5 828 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 UBE2Q2Q8WVN8 375 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 HERVK_113Q902F9 699 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 SYN2Q92777 582 aaPredicted RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 BADQ92934 168 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 EEF2KMTQ96G04 330 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 HPDLQ96IR7 371 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 CALR3Q96L12 384 aaKnown RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 RNPC3Q96LT9 517 aaKnown RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 ZNF558Q96NG5 402 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 GAD1Q99259 594 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 EIF2AQ9BY44 585 aaKnown RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 FGFBP2Q9BYJ0 223 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 STK33Q9BYT3 514 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 SNX25Q9H3E2 840 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 NXF3Q9H4D5 531 aaKnown RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 UBE2TQ9NPD8 197 aaPredicted RBP5.72□□□□□ -1.49
NEK4-205ENST00000493199 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.72□□□□□ -1.49
NEK4-205ENST00000493199 TMEM51Q9NW97 253 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 COQ4Q9Y3A0 265 aa5.72□□□□□ -1.49
NEK4-205ENST00000493199 SF3B1O75533 1304 aaKnown RBP eCLIP5.72□□□□□ -1.49
NEK4-205ENST00000493199 TRIM43BA6NCK2 446 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 DLL1O00548 723 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 PODXLO00592 558 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 SYN3O14994 580 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 INPPL1O15357 1258 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 DGKIO75912 1065 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 HLA-DRAP01903 254 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 C4BPAP04003 597 aaKnown RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 POLR2BP30876 1174 aaKnown RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 KRT9P35527 623 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 USP8P40818 1118 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 TNFSF9P41273 254 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 PDE6CP51160 858 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 KRT83P78385 493 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 ZBED6P86452 979 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 UBE3AQ05086 875 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 RAPGEF1Q13905 1077 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 USP41Q3LFD5 358 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 TDRD12Q587J7 1177 aaKnown RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 UBXN11Q5T124 520 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 C10orf76Q5T2E6 689 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 SFMBT2Q5VUG0 894 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 SLC39A4Q6P5W5 647 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 TRIM65Q6PJ69 517 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 CRELD2Q6UXH1 353 aaPredicted RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 ALKAL1Q6UXT8 129 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 CYP26C1Q6V0L0 522 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 C4orf50Q6ZRC1 276 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 ANKS3Q6ZW76 656 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 ZNF365Q70YC5 407 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 TMTC1Q8IUR5 882 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 VSTM4Q8IW00 320 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 GPR65Q8IYL9 337 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 DCP1BQ8IZD4 617 aaKnown RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 TOP6BLQ8N6T0 577 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 SMG8Q8ND04 991 aaKnown RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 HELQQ8TDG4 1101 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 TRIM43Q96BQ3 446 aaPredicted RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 CCDC42Q96M95 316 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 PLVAPQ9BX97 442 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 MTMR12Q9C0I1 747 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 NIF3L1Q9GZT8 377 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 WNT8AQ9H1J5 351 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 VRTNQ9H8Y1 702 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 SLC28A3Q9HAS3 691 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 KLK14Q9P0G3 267 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 NXF1Q9UBU9 619 aaKnown RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 HESX1Q9UBX0 185 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 LCMT1Q9UIC8 334 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 ZMYND8Q9ULU4 1186 aaPredicted RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 MAFFQ9ULX9 164 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 CAPN11Q9UMQ6 739 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 SNX9Q9Y5X1 595 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 A0A0C4DFX4 3053 aa5.71□□□□□ -1.5
NEK4-205ENST00000493199 TRIP12Q14669 1992 aaPredicted RBP5.71□□□□□ -1.5
NEK4-205ENST00000493199 ANKRD62A6NC57 917 aa5.7□□□□□ -1.5
NEK4-205ENST00000493199 GOLGA6L9A6NEM1 432 aa5.7□□□□□ -1.5
NEK4-205ENST00000493199 A8MXQ7 604 aa5.7□□□□□ -1.5
NEK4-205ENST00000493199 TISP43B9A030 160 aa5.7□□□□□ -1.5
NEK4-205ENST00000493199 TMEM189-UBE2V1I3L0A0 370 aa5.7□□□□□ -1.5
NEK4-205ENST00000493199 ABLIM1O14639 778 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms