RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 ARHGEF37A1IGU5 675 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 FRMD3A2A2Y4 597 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 ANHXE9PGG2 379 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 SPTLC2O15270 562 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 CCL16O15467 120 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 OAZ2O95190 189 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 ELF1P32519 619 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 MCM4P33991 863 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 STAT6P42226 847 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 CLCN5P51795 746 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 ROR1Q01973 937 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 ALCAMQ13740 583 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 CTXN3Q4LDR2 81 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 ZBTB41Q5SVQ8 909 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 ADALQ6DHV7 355 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 ZNF280DQ6N043 979 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 SFR1Q86XK3 245 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 TCEAL8Q8IYN2 117 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 BEST2Q8NFU1 509 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 LRRC27Q9C0I9 530 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 SMOC2Q9H3U7 446 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 MRPL44Q9H9J2 332 aaKnown RBP12.49□□□□□ -0.41
LRTM1-202ENST00000493075 AVENQ9NQS1 362 aaPredicted RBP12.49□□□□□ -0.41
LRTM1-202ENST00000493075 WNT16Q9UBV4 365 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 FBXL5Q9UKA1 691 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 KCNH3Q9ULD8 1083 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 EXOC7Q9UPT5 735 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
LRTM1-202ENST00000493075 A0A087X0B3 334 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 YEATS4O95619 227 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 PDGFBP01127 241 aaPredicted RBP12.48□□□□□ -0.41
LRTM1-202ENST00000493075 PTPN5P54829 565 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 SPAG1Q07617 926 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 IER5LQ5T953 404 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 ATL3Q6DD88 541 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 GET4Q7L5D6 327 aaPredicted RBP12.48□□□□□ -0.41
LRTM1-202ENST00000493075 ACCSQ96QU6 501 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 PANK2Q9BZ23 570 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 IRF2BPLQ9H1B7 796 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 CUEDC2Q9H467 287 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 TFIP11Q9UBB9 837 aaKnown RBP12.48□□□□□ -0.41
LRTM1-202ENST00000493075 DNMT3BQ9UBC3 853 aaKnown RBP12.48□□□□□ -0.41
LRTM1-202ENST00000493075 AGO2Q9UKV8 859 aaKnown RBP12.48□□□□□ -0.41
LRTM1-202ENST00000493075 CDH7Q9ULB5 785 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 C2CD2Q9Y426 696 aa12.48□□□□□ -0.41
LRTM1-202ENST00000493075 WDR27A2RRH5 827 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 CUTAO60888 179 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 HSP90AA1P07900 732 aaKnown RBP12.47□□□□□ -0.41
LRTM1-202ENST00000493075 ZSCAN22P10073 491 aaPredicted RBP12.47□□□□□ -0.41
LRTM1-202ENST00000493075 SRFP11831 508 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 PTPN2P17706 415 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 TYMPP19971 482 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 ADSSP30520 456 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 VCPP55072 806 aaKnown RBP12.47□□□□□ -0.41
LRTM1-202ENST00000493075 LILRA4P59901 499 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 NHLH1Q02575 133 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 YWHAHQ04917 246 aaPredicted RBP12.47□□□□□ -0.41
LRTM1-202ENST00000493075 HTR4Q13639 388 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 L1TD1Q5T7N2 865 aaKnown RBP12.47□□□□□ -0.41
LRTM1-202ENST00000493075 ASTLQ6HA08 431 aaPredicted RBP12.47□□□□□ -0.41
LRTM1-202ENST00000493075 JADE1Q6IE81 842 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 NT5DC4Q86YG4 428 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 FGF13Q92913 245 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 PANK4Q9NVE7 773 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 AFF4Q9UHB7 1163 aaKnown RBP12.47□□□□□ -0.41
LRTM1-202ENST00000493075 POLIQ9UNA4 740 aa12.47□□□□□ -0.41
LRTM1-202ENST00000493075 TRIOO75962 3097 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 ANO9A1A5B4 782 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 OR6C75A6NL08 312 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 TISP43B9A030 160 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 PIRO00625 290 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 PRRG1O14668 218 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 MICAL2O94851 1124 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 IL18RAPO95256 599 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 GCNT3O95395 438 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 LDHAP00338 332 aaKnown RBP12.46□□□□□ -0.41
LRTM1-202ENST00000493075 LRG1P02750 347 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 IDEP14735 1019 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 ACOT2P49753 483 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 ARPP19P56211 112 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 NTHL1P78549 312 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 AMPD3Q01432 767 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 TMEM132DQ14C87 1099 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 E2F4Q16254 413 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 PABPC1LQ4VXU2 614 aaKnown RBP12.46□□□□□ -0.41
LRTM1-202ENST00000493075 C9orf57Q5W0N0 161 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 CNNM4Q6P4Q7 775 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 CRELD2Q6UXH1 353 aaPredicted RBP12.46□□□□□ -0.41
LRTM1-202ENST00000493075 DSTYKQ6XUX3 929 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 USP37Q86T82 979 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 CCDC65Q8IXS2 484 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 IQUBQ8NA54 791 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 PRSS33Q8NF86 280 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 ITFG1Q8TB96 612 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 POMGNT1Q8WZA1 660 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms