RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CC2D1AQ6P1N0 951 aaPredicted RBP15.03■□□□□ -0
PTPN7-216ENST00000492977 TMEM270Q6UE05 265 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 APBB1IPQ7Z5R6 666 aaPredicted RBP15.03■□□□□ -0
PTPN7-216ENST00000492977 EFCAB13Q8IY85 973 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 UBR7Q8N806 425 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 CEP120Q8N960 986 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 CPB2Q96IY4 423 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 PNKPQ96T60 521 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 ADPGKQ9BRR6 497 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 KATNAL1Q9BW62 490 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 GCOM2Q9BZD3 368 aaPredicted RBP15.03■□□□□ -0
PTPN7-216ENST00000492977 NIF3L1Q9GZT8 377 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 ZNF446Q9NWS9 450 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 UVRAGQ9P2Y5 699 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 COG5Q9UP83 839 aa15.03■□□□□ -0
PTPN7-216ENST00000492977 LACTBL1A8MY62 500 aa15.02■□□□□ -0
PTPN7-216ENST00000492977 ZRANB2O95218 330 aaKnown RBP eCLIP15.02■□□□□ -0
PTPN7-216ENST00000492977 UNGP13051 313 aaPredicted RBP15.02■□□□□ -0
PTPN7-216ENST00000492977 ADAM17P78536 824 aa15.02■□□□□ -0
PTPN7-216ENST00000492977 C2orf54Q08AI8 447 aa15.02■□□□□ -0
PTPN7-216ENST00000492977 RBBP8NLQ8NC74 664 aaPredicted RBP15.02■□□□□ -0
PTPN7-216ENST00000492977 ACTRT1Q8TDG2 376 aa15.02■□□□□ -0
PTPN7-216ENST00000492977 RUBCNQ92622 972 aa15.02■□□□□ -0
PTPN7-216ENST00000492977 TRIM11Q96F44 468 aa15.02■□□□□ -0
PTPN7-216ENST00000492977 MS4A14Q96JA4 679 aa15.02■□□□□ -0
PTPN7-216ENST00000492977 CCDC94Q9BW85 323 aaPredicted RBP15.02■□□□□ -0
PTPN7-216ENST00000492977 GOLPH3Q9H4A6 298 aa15.02■□□□□ -0
PTPN7-216ENST00000492977 UMODL1Q5DID0 1318 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 MGAMO43451 1857 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 KPNA6O60684 536 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 GPR32O75388 356 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 CLSTN1O94985 981 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 ALDH1A1P00352 501 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 CYP1A1P04798 512 aaPredicted RBP15.02□□□□□ -0.01
PTPN7-216ENST00000492977 MYBL1P10243 752 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 CYP2C9P11712 490 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 AKR1A1P14550 325 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 GNA15P30679 374 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 DNA2P51530 1060 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 ZNF132P52740 706 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 FCGRTP55899 365 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 YWHAEP62258 255 aaKnown RBP15.02□□□□□ -0.01
PTPN7-216ENST00000492977 ZNF699Q32M78 642 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 DCAF4L1Q3SXM0 396 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 GLE1Q53GS7 698 aaKnown RBP15.02□□□□□ -0.01
PTPN7-216ENST00000492977 NT5DC4Q86YG4 428 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 CD302Q8IX05 232 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 TMEM192Q8IY95 271 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 SMC1BQ8NDV3 1235 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 ZNF653Q96CK0 615 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 PHF12Q96QT6 1004 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 RPS6KC1Q96S38 1066 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 XYLT2Q9H1B5 865 aa15.02□□□□□ -0.01
PTPN7-216ENST00000492977 TMEM88BA6NKF7 163 aa15.01□□□□□ -0.01
PTPN7-216ENST00000492977 DUSP11O75319 330 aaKnown RBP15.01□□□□□ -0.01
PTPN7-216ENST00000492977 MYL3P08590 195 aa15.01□□□□□ -0.01
PTPN7-216ENST00000492977 CENPCQ03188 943 aa15.01□□□□□ -0.01
PTPN7-216ENST00000492977 FSCN1Q16658 493 aaKnown RBP15.01□□□□□ -0.01
PTPN7-216ENST00000492977 KIZQ2M2Z5 673 aa15.01□□□□□ -0.01
PTPN7-216ENST00000492977 RASGEF1CQ8N431 466 aa15.01□□□□□ -0.01
PTPN7-216ENST00000492977 LENG1Q96BZ8 264 aaPredicted RBP15.01□□□□□ -0.01
PTPN7-216ENST00000492977 ACAP3Q96P50 834 aa15.01□□□□□ -0.01
PTPN7-216ENST00000492977 FAM49AQ9H0Q0 323 aaPredicted RBP15.01□□□□□ -0.01
PTPN7-216ENST00000492977 AVENQ9NQS1 362 aaPredicted RBP15.01□□□□□ -0.01
PTPN7-216ENST00000492977 ALG6Q9Y672 507 aa15.01□□□□□ -0.01
PTPN7-216ENST00000492977 MIF4GDA9UHW6 222 aaKnown RBP15□□□□□ -0.01
PTPN7-216ENST00000492977 NFICP08651 508 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 GNAT1P11488 350 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 CTGFP29279 349 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 ATICP31939 592 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 GRM5P41594 1212 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 VSNL1P62760 191 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 SLC10A6Q3KNW5 377 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 MFSD14CQ5VZR4 134 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 SCARA3Q6AZY7 606 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 JADE1Q6IE81 842 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 MCOLN2Q8IZK6 566 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 USP38Q8NB14 1042 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 VCPIP1Q96JH7 1222 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 NUP85Q9BW27 656 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 CISHQ9NSE2 258 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 RBM12Q9NTZ6 932 aaKnown RBP15□□□□□ -0.01
PTPN7-216ENST00000492977 SMARCAL1Q9NZC9 954 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 EHD2Q9NZN4 543 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 CNOT8Q9UFF9 292 aaKnown RBP15□□□□□ -0.01
PTPN7-216ENST00000492977 TTC7AQ9ULT0 858 aaPredicted RBP15□□□□□ -0.01
PTPN7-216ENST00000492977 C2CD2Q9Y426 696 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 MROH7Q68CQ1 1323 aa15□□□□□ -0.01
PTPN7-216ENST00000492977 PGRMC1O00264 195 aaKnown RBP14.99□□□□□ -0.01
PTPN7-216ENST00000492977 DDX3YO15523 660 aaKnown RBP14.99□□□□□ -0.01
PTPN7-216ENST00000492977 MEFVO15553 781 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-216ENST00000492977 THAP12O43422 761 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 CEP104O60308 925 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 CALCAP01258 141 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 DARSP14868 501 aaKnown RBP14.99□□□□□ -0.01
PTPN7-216ENST00000492977 AXLP30530 894 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 HOXA11P31270 313 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-216ENST00000492977 PSMC4P43686 418 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 NSFP46459 744 aaKnown RBP14.99□□□□□ -0.01
PTPN7-216ENST00000492977 PURAQ00577 322 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms