RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 KAT5Q92993 513 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 ELMO3Q96BJ8 720 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 KREMEN1Q96MU8 473 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 ZMAT2Q96NC0 199 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 GPR88Q9GZN0 384 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 CXCL16Q9H2A7 254 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 HIPK3Q9H422 1215 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 NHEJ1Q9H9Q4 299 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 DPP3Q9NY33 737 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 KLK14Q9P0G3 267 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 ARHGAP20Q9P2F6 1191 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 ITGA11Q9UKX5 1188 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 BZW2Q9Y6E2 419 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 SMIM28A0A1B0GU29 152 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 FOXN3O00409 490 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 GFPT2O94808 682 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 PLEKP08567 350 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 PNMA6AP0CW24 399 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 TBXAS1P24557 533 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 CYLC1P35663 651 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 ZBTB6Q15916 424 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 ZNF699Q32M78 642 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 GLRA4Q5JXX5 417 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 IRF2BP2Q7Z5L9 587 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 MRPL10Q7Z7H8 261 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 CCDC170Q8IYT3 715 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 BEST2Q8NFU1 509 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 SHC3Q92529 594 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 TAF4BQ92750 862 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 CCDC42Q96M95 316 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 HTATIP2Q9BUP3 242 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 APOBEC3GQ9HC16 384 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 SIX4Q9UIU6 781 aa15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 UBQLN1Q9UMX0 589 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-210ENST00000492909 SSU72P8A0A1W2PR75 194 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 XPOTO43592 962 aaKnown RBP15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 EVI5O60447 810 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 NBNO60934 754 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 SLU7O95391 586 aaKnown RBP15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 PRKCIP41743 596 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 CUL2Q13617 745 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 SCARA3Q6AZY7 606 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 CXorf38Q8TB03 319 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 JAKMIP2Q96AA8 810 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 FTHL17Q9BXU8 183 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 XYLT2Q9H1B5 865 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 DEF6Q9H4E7 631 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 GIT1Q9Y2X7 761 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 NUB1Q9Y5A7 615 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 EPN1Q9Y6I3 576 aaPredicted RBP15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 SCN5AQ14524 2016 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 UMODL1Q5DID0 1318 aa15.12■□□□□ 0.01
PDZRN3-210ENST00000492909 NDUFA10O95299 355 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 PARNO95453 639 aaKnown RBP15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 POLR2BP30876 1174 aaKnown RBP15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 ATICP31939 592 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 EIF4A3P38919 411 aaKnown RBP15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 GUCY2FP51841 1108 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 RBP5P82980 135 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 MAPK8IP2Q13387 824 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 NAA30Q147X3 362 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 FAM43BQ6ZT52 329 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 TOGARAM2Q6ZUX3 1019 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 LPPQ93052 612 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 PGBD4Q96DM1 585 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 PPP1R12CQ9BZL4 782 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 L2HGDHQ9H9P8 463 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 RGS18Q9NS28 235 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 MEIS3P2A8K0S8 358 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 AKR1B10O60218 316 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 CCDC175P0C221 793 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 MLH1P40692 756 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 USP8P40818 1118 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 GPNMBQ14956 572 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 PLEKHG4Q58EX7 1191 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 ZNF667Q5HYK9 610 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 AGMOQ6ZNB7 445 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 SLC24A5Q71RS6 500 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 FAM71AQ8IYT1 594 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 RNF169Q8NCN4 708 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 TET1Q8NFU7 2136 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 C18orf25Q96B23 403 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 ZFP42Q96MM3 310 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 RPS6KC1Q96S38 1066 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 DESI2Q9BSY9 194 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 NIF3L1Q9GZT8 377 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 HAUS4Q9H6D7 363 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 PRDM5Q9NQX1 630 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 TUBGCP4Q9UGJ1 667 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 TBX21Q9UL17 535 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 AGAP1Q9UPQ3 857 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 SCN1AP35498 2009 aa15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 TDRD15B5MCY1 1934 aaKnown RBP15.11■□□□□ 0.01
PDZRN3-210ENST00000492909 IPO7O95373 1038 aaKnown RBP15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 CLTBP09497 229 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 ATF7P17544 494 aaPredicted RBP15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 SYN1P17600 705 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 CYP3A5P20815 502 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 KIF11P52732 1056 aa15.1■□□□□ 0.01
PDZRN3-210ENST00000492909 MLLT1Q03111 559 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms