RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 GPR89AB7ZAQ6 455 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 NT5C1B-RDH14C9J2C7 533 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ADAMTS3O15072 1205 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SIAH2O43255 324 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SMAD6O43541 496 aaKnown RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SLC25A17O43808 307 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ZC3H11AO75152 810 aaKnown RBP eCLIP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 NIPSNAP2O75323 286 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 OFD1O75665 1012 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 NEBLO76041 1014 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 AVPP01185 164 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ALBP02768 609 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 RB1P06400 928 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 QDPRP09417 244 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 GPR89BP0CG08 455 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 RAG1P15918 1043 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 PTGS2P35354 604 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 IL15P40933 162 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 TECP42680 631 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ACAA2P42765 397 aaKnown RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 PLCD1P51178 756 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 CASP6P55212 293 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 CARD18P57730 90 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 RNASE9P60153 205 aaKnown RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 CSNK2BP67870 215 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 NOP14P78316 857 aaKnown RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 DDR1Q08345 913 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 MAP4K2Q12851 820 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 CAMK2DQ13557 499 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 GALNT3Q14435 633 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 HABP2Q14520 560 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 EFTUD2Q15029 972 aaKnown RBP eCLIP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 CNGA2Q16280 664 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 TSTQ16762 297 aaKnown RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 PTPRNQ16849 979 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 PFKFB3Q16875 520 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF827Q17R98 1081 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 LRIT3Q3SXY7 679 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 Q3ZCU0 254 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 Q4G0T1 1027 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 FLYWCH1Q4VC44 716 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 MDH1BQ5I0G3 518 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 C1orf185Q5T7R7 199 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 OLFML2BQ68BL8 750 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 PDPK2PQ6A1A2 396 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 WDR93Q6P2C0 686 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 PGBD2Q6P3X8 592 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 PGM2L1Q6PCE3 622 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 AAGABQ6PD74 315 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ZCCHC12Q6PEW1 402 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SLC2A7Q6PXP3 512 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 AGMOQ6ZNB7 445 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 RUFY4Q6ZNE9 571 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 LRRC69Q6ZNQ3 347 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 DENND5BQ6ZUT9 1274 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 TXNRD3Q86VQ6 643 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SPARTQ8N0X7 666 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 KRT78Q8N1N4 520 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ZSCAN1Q8NBB4 408 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 XXYLT1Q8NBI6 393 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 C3orf20Q8ND61 904 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 CDC26Q8NHZ8 85 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SNIP1Q8TAD8 396 aaKnown RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SLC22A8Q8TCC7 542 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF507Q8TCN5 953 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 TRPC4APQ8TEL6 797 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 GRK7Q8WTQ7 553 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 CHTF18Q8WVB6 975 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 TMEM40Q8WWA1 233 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 FOXJ1Q92949 421 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 TRIM43Q96BQ3 446 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF764Q96H86 408 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 BTBD6Q96KE9 485 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 CNOT6LQ96LI5 555 aaKnown RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SIKE1Q9BRV8 207 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SPZ1Q9BXG8 430 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 BCO2Q9BYV7 579 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SRCIN1Q9C0H9 1055 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ISCUQ9H1K1 167 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 WDR6Q9NNW5 1121 aaKnown RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ZBTB40Q9NUA8 1239 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 DECR2Q9NUI1 292 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 VPS18Q9P253 973 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SUCLA2Q9P2R7 463 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 GMPR2Q9P2T1 348 aaKnown RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ARHGAP26Q9UNA1 814 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ATP23Q9Y6H3 246 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 ATAD2Q6PL18 1390 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 A0A0U1RQK1 487 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 LOC100653049A0A140TA62 436 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 A0A1W2PRU2 124 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF320A2RRD8 509 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 PMS2P1A4D2B8 440 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 TMEM221A6NGB7 291 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 CAPN8A6NHC0 703 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 DCDC2CA8MYV0 355 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 H7BY64 318 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 LSM1O15116 133 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 STRNO43815 780 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 KRT34O76011 436 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms