RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 SRRDQ9UH36 339 aa5.73□□□□□ -1.49
PRPF4B-207ENST00000490399 CHST2Q9Y4C5 530 aa5.73□□□□□ -1.49
PRPF4B-207ENST00000490399 GOLGA6CA6NDK9 693 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 GOLGA6BA6NDN3 693 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 PRSS29PA6NIE9 313 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 B3GALT2O43825 422 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 RPS6KA4O75676 772 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 HAUS5O94927 633 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 GOLGA6DP0CG33 693 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 NR4A1P22736 598 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 PSMC1P62191 440 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 NKX6-1P78426 367 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 GFOD2Q3B7J2 385 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 AGAP9Q5VTM2 703 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 GDF7Q7Z4P5 450 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 FAM90A1Q86YD7 464 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 Q8N1X5 172 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 OR56A1Q8NGH5 318 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 TLR10Q9BXR5 811 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 B3GNT5Q9BYG0 378 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 MRPL46Q9H2W6 279 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 KLHL11Q9NVR0 708 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 PARPBPQ9NWS1 579 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 AURKAIP1Q9NWT8 199 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 OBP2AQ9NY56 170 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 GOLGA6AQ9NYA3 693 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 FAM30AQ9NZY2 134 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 JKAMPQ9P055 326 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 USP25Q9UHP3 1055 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 FEZ2Q9UHY8 353 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 CPA4Q9UI42 421 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 PCDHA6Q9UN73 950 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 MAP3K2Q9Y2U5 619 aa5.72□□□□□ -1.49
PRPF4B-207ENST00000490399 TUSC2O75896 110 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 NCR1O76036 304 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 RECQL4O94761 1208 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 ARIH2O95376 493 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 HMGB1P09429 215 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 ZFP36P26651 326 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 PIK3CGP48736 1102 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 SLFN5Q08AF3 891 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 FOXE3Q13461 319 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 CRIP3Q6Q6R5 217 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 NPNTQ6UXI9 565 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 DAAM2Q86T65 1068 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 RHOT2Q8IXI1 618 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 SLC17A8Q8NDX2 589 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 TMIEQ8NEW7 156 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 NLGN4YQ8NFZ3 816 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 CACTINQ8WUQ7 758 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 TIFAQ96CG3 184 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 DCLRE1CQ96SD1 692 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 ZNF747Q9BV97 191 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 IMPG2Q9BZV3 1241 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 VPS11Q9H270 941 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 WDCPQ9H6R7 721 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 ZNF703Q9H7S9 590 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 SLC2A4RGQ9NR83 387 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 ATP11BQ9Y2G3 1177 aa5.71□□□□□ -1.5
PRPF4B-207ENST00000490399 ERC2O15083 957 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 TRIM24O15164 1050 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 MATN4O95460 622 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 GJB1P08034 283 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 ELANEP08246 267 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 CKBP12277 381 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 FCER1AP12319 257 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 HDCP19113 662 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 GCSHP23434 173 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 RAB1AP62820 205 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 HSD11B2P80365 405 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 ZNF365Q70YC5 407 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 ZNF276Q8N554 614 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 NSUN7Q8NE18 718 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 ZNF503Q96F45 646 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 KLHL32Q96NJ5 620 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 BRD9Q9H8M2 597 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 C1orf112Q9NSG2 853 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 VSX1Q9NZR4 365 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 CDYLQ9Y232 598 aa5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 FRMPD2Q68DX3 1309 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-207ENST00000490399 A0A088AWK7 358 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 A0A1B0GTW7 788 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 ZNF785A8K8V0 405 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 NDUFA10O95299 355 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 GNAI3P08754 354 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 FTH1P19P0C7X4 201 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 FGFR4P22455 802 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 GNAI1P63096 354 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 OCA2Q04671 838 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 EXOSC9Q06265 439 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 GALEQ14376 348 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 KHDC1LQ5JSQ8 128 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 IGFL4Q6B9Z1 124 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 SWSAP1Q6NVH7 229 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 LRRC55Q6ZSA7 311 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 PCSK9Q8NBP7 692 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 AKIP1Q9NQ31 210 aa5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 MRPS18AQ9NVS2 196 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-207ENST00000490399 SIDT1Q9NXL6 827 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms