RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 BHMT2Q9H2M3 363 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 BRD9Q9H8M2 597 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 ZMAT3Q9HA38 289 aaKnown RBP4.94□□□□□ -1.62
CD46-216ENST00000490278 RLIMQ9NVW2 624 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 ZDHHC8Q9ULC8 765 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 PCDHA6Q9UN73 950 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 A0A1W2PPL8 197 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 CDHR4A6H8M9 788 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 PHGDHO43175 533 aaKnown RBP4.93□□□□□ -1.62
CD46-216ENST00000490278 PLIN1O60240 522 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 FOXD2O60548 495 aaPredicted RBP4.93□□□□□ -1.62
CD46-216ENST00000490278 MATN4O95460 622 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 AHSGP02765 367 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 ANXA1P04083 346 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 ITGB1P05556 798 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 SLC6A2P23975 617 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 BUD31P41223 144 aaPredicted RBP4.93□□□□□ -1.62
CD46-216ENST00000490278 SCNN1GP51170 649 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 CHN2P52757 468 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 CRHR2Q13324 411 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 SEMA5AQ13591 1074 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 PRKD1Q15139 912 aaPredicted RBP4.93□□□□□ -1.62
CD46-216ENST00000490278 SAFBQ15424 915 aaKnown RBP eCLIP4.93□□□□□ -1.62
CD46-216ENST00000490278 UTP14CQ5TAP6 766 aaKnown RBP4.93□□□□□ -1.62
CD46-216ENST00000490278 COL23A1Q86Y22 540 aaPredicted RBP4.93□□□□□ -1.62
CD46-216ENST00000490278 PDSS2Q86YH6 399 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 SYT12Q8IV01 421 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 LRTOMTQ8WZ04 291 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 PHACTR3Q96KR7 559 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 C22orf23Q9BZE7 217 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 ATP6V0A4Q9HBG4 840 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 SLAMF7Q9NQ25 335 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 SMPD4Q9NXE4 827 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 CFAP97Q9P2B7 532 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 CPA4Q9UI42 421 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 FAM50BQ9Y247 325 aa4.93□□□□□ -1.62
CD46-216ENST00000490278 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 PRSS29PA6NIE9 313 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 LEFTY2O00292 366 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 FRS3O43559 492 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 MGEA5O60502 916 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 AGFG2O95081 481 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 GJB1P08034 283 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 NBPF7P0C2Y1 421 aaPredicted RBP4.92□□□□□ -1.62
CD46-216ENST00000490278 PHKG2P15735 406 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 PEX2P28328 305 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 PHKA1P46020 1223 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 SOX8P57073 446 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 NHLH2Q02577 135 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 RRP1BQ14684 758 aaKnown RBP4.92□□□□□ -1.62
CD46-216ENST00000490278 KIF22Q14807 665 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 EMC10Q5UCC4 262 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 APOA5Q6Q788 366 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 TBC1D15Q8TC07 691 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 C8orf49Q96NF6 230 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 REXO4Q9GZR2 422 aaKnown RBP4.92□□□□□ -1.62
CD46-216ENST00000490278 KLC2Q9H0B6 622 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 RSAD1Q9HA92 442 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 PIH1D1Q9NWS0 290 aaKnown RBP4.92□□□□□ -1.62
CD46-216ENST00000490278 TPCN1Q9ULQ1 816 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 PCDHGB6Q9Y5F9 930 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 XDHP47989 1333 aa4.92□□□□□ -1.62
CD46-216ENST00000490278 ANO9A1A5B4 782 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 DIRC3C9JPN6 131 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 APAF1O14727 1248 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 MUSKO15146 869 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 GNAI2P04899 355 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 KITP10721 976 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 RARBP10826 455 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 CKBP12277 381 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 NPR1P16066 1061 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 HDCP19113 662 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 GCSHP23434 173 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 ACRV1P26436 265 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 APOBEC3AP31941 199 aaPredicted RBP4.91□□□□□ -1.62
CD46-216ENST00000490278 PSMC1P62191 440 aaKnown RBP4.91□□□□□ -1.62
CD46-216ENST00000490278 NOMO3P69849 1222 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 EXOSC9Q06265 439 aaKnown RBP4.91□□□□□ -1.62
CD46-216ENST00000490278 POLD3Q15054 466 aaPredicted RBP4.91□□□□□ -1.62
CD46-216ENST00000490278 FAM102AQ5T9C2 384 aaPredicted RBP4.91□□□□□ -1.62
CD46-216ENST00000490278 AGAP9Q5VTM2 703 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 METRNLQ641Q3 311 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 ZFPM1Q8IX07 1006 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 RHOT2Q8IXI1 618 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 CELF5Q8N6W0 485 aaKnown RBP4.91□□□□□ -1.62
CD46-216ENST00000490278 IL31RAQ8NI17 732 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 NUP133Q8WUM0 1156 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 ANKS1AQ92625 1134 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 MRGPRX1Q96LB2 322 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 DCLRE1CQ96SD1 692 aaKnown RBP4.91□□□□□ -1.62
CD46-216ENST00000490278 LRRC27Q9C0I9 530 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.91□□□□□ -1.62
CD46-216ENST00000490278 EIF2B4Q9UI10 523 aaKnown RBP4.91□□□□□ -1.62
CD46-216ENST00000490278 SLC45A2Q9UMX9 530 aa4.91□□□□□ -1.62
CD46-216ENST00000490278 ZNF785A8K8V0 405 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 TRIM24O15164 1050 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 RECQL4O94761 1208 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 PRSS23O95084 383 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 MYF5P13349 255 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 SLC7A1P30825 629 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms