RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 NOL8Q76FK4 1167 aaKnown RBP7.11□□□□□ -1.27
VPS26A-206ENST00000489794 MAEAQ7L5Y9 396 aa7.11□□□□□ -1.27
VPS26A-206ENST00000489794 SH2D3CQ8N5H7 860 aa7.11□□□□□ -1.27
VPS26A-206ENST00000489794 PGBD4Q96DM1 585 aa7.11□□□□□ -1.27
VPS26A-206ENST00000489794 FBXO34Q9NWN3 711 aa7.11□□□□□ -1.27
VPS26A-206ENST00000489794 GAGE12BA1L429 117 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 GAGE12HA6NDE8 117 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 PHGDHO43175 533 aaKnown RBP7.1□□□□□ -1.27
VPS26A-206ENST00000489794 FRS3O43559 492 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 CHEK2O96017 543 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 GNAI2P04899 355 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 CKBP12277 381 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 RABL3Q5HYI8 236 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 AGAP9Q5VTM2 703 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 GDF7Q7Z4P5 450 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 SCAMP4Q969E2 229 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 RNPEPQ9H4A4 650 aa7.1□□□□□ -1.27
VPS26A-206ENST00000489794 PIH1D1Q9NWS0 290 aaKnown RBP7.1□□□□□ -1.27
VPS26A-206ENST00000489794 A0A1W2PPL8 197 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 CDHR4A6H8M9 788 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 C1QTNF3-AMACRE9PGA6 284 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 GOLIM4O00461 696 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 TPP1O14773 563 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 PEX11BO96011 259 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 ITGB1P05556 798 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 SBK3P0C264 359 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 RHCEP18577 417 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 APOBEC3AP31941 199 aaPredicted RBP7.09□□□□□ -1.27
VPS26A-206ENST00000489794 USP14P54578 494 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 MXRA7P84157 204 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 PURAQ00577 322 aaKnown RBP7.09□□□□□ -1.27
VPS26A-206ENST00000489794 RHDQ02161 417 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 KIF22Q14807 665 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 FAM102AQ5T9C2 384 aaPredicted RBP7.09□□□□□ -1.27
VPS26A-206ENST00000489794 ARMC6Q6NXE6 501 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 CCDC149Q6ZUS6 474 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 PRRT2Q7Z6L0 340 aaPredicted RBP7.09□□□□□ -1.27
VPS26A-206ENST00000489794 SYT12Q8IV01 421 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 C1orf210Q8IVY1 113 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 TBC1D15Q8TC07 691 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 TNPO1Q92973 898 aaKnown RBP7.09□□□□□ -1.27
VPS26A-206ENST00000489794 MED15Q96RN5 788 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 PNKPQ96T60 521 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 SLC46A2Q9BY10 475 aa7.09□□□□□ -1.27
VPS26A-206ENST00000489794 DDX20Q9UHI6 824 aaKnown RBP7.09□□□□□ -1.27
VPS26A-206ENST00000489794 SCAF4O95104 1147 aaKnown RBP7.08□□□□□ -1.28
VPS26A-206ENST00000489794 MATN4O95460 622 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 MYL1P05976 194 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 HLA-DOAP06340 250 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 GJB1P08034 283 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 RARBP10826 455 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 PIGFQ07326 219 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 TOB2Q14106 344 aaPredicted RBP7.08□□□□□ -1.28
VPS26A-206ENST00000489794 HABP2Q14520 560 aaPredicted RBP7.08□□□□□ -1.28
VPS26A-206ENST00000489794 USP39Q53GS9 565 aaKnown RBP7.08□□□□□ -1.28
VPS26A-206ENST00000489794 KHDC1LQ5JSQ8 128 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 UTP14CQ5TAP6 766 aaKnown RBP7.08□□□□□ -1.28
VPS26A-206ENST00000489794 C11orf96Q7Z7L8 435 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 PALM2Q8IXS6 379 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 PLBD2Q8NHP8 589 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 SUCLG2Q96I99 432 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 PHACTR3Q96KR7 559 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 ARMT1Q9H993 441 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 GPR35Q9HC97 309 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 DDX21Q9NR30 783 aaKnown RBP eCLIP7.08□□□□□ -1.28
VPS26A-206ENST00000489794 SORCS3Q9UPU3 1222 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 CHST2Q9Y4C5 530 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 PAXBP1Q9Y5B6 917 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 PCDHA1Q9Y5I3 950 aa7.08□□□□□ -1.28
VPS26A-206ENST00000489794 GRXCR1A8MXD5 290 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 LEFTY2O00292 366 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 MGEA5O60502 916 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 MYBP10242 640 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 TRIM27P14373 513 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 PHKG2P15735 406 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 RPL17P18621 184 aaKnown RBP7.07□□□□□ -1.28
VPS26A-206ENST00000489794 SLC6A4P31645 630 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 POLD3Q15054 466 aaPredicted RBP7.07□□□□□ -1.28
VPS26A-206ENST00000489794 CNN3Q15417 329 aaKnown RBP7.07□□□□□ -1.28
VPS26A-206ENST00000489794 KIAA0753Q2KHM9 967 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 RNF220Q5VTB9 566 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 TSHZ3Q63HK5 1081 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 METRNLQ641Q3 311 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 FOXR2Q6PJQ5 311 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 RNF207Q6ZRF8 634 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 PPP1R3BQ86XI6 285 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 CCAR1Q8IX12 1150 aaKnown RBP7.07□□□□□ -1.28
VPS26A-206ENST00000489794 FAM156AQ8NDB6 213 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 CPT1CQ8TCG5 803 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 FBXO41Q8TF61 875 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 SARGQ9BW04 601 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 C1orf43Q9BWL3 253 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 KRTAP9-3Q9BYQ3 159 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 RSAD1Q9HA92 442 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.07□□□□□ -1.28
VPS26A-206ENST00000489794 TRPM5Q9NZQ8 1165 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 TPCN1Q9ULQ1 816 aa7.07□□□□□ -1.28
VPS26A-206ENST00000489794 NEU2Q9Y3R4 380 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms