RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 MSRB2Q9Y3D2 182 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 CDY1Q9Y6F8 540 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 APC2O95996 2303 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 MOSPD3O75425 235 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 PSMD10O75832 226 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 CAPNS1P04632 268 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 KPNA1P52294 538 aaPredicted RBP10.2□□□□□ -0.78
SSBP1-212ENST00000489378 MLLT6P55198 1093 aaPredicted RBP10.2□□□□□ -0.78
SSBP1-212ENST00000489378 TUSC3Q13454 348 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 COL28A1Q2UY09 1125 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 PLK5Q496M5 336 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 RTL10Q7L3V2 364 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 CDR2LQ86X02 465 aaPredicted RBP10.2□□□□□ -0.78
SSBP1-212ENST00000489378 MFSD6LQ8IWD5 586 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 ABCA7Q8IZY2 2146 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 REXO1Q8N1G1 1221 aaKnown RBP10.2□□□□□ -0.78
SSBP1-212ENST00000489378 DEFB124Q8NES8 71 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 RDM1Q8NG50 284 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 TTC8Q8TAM2 541 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 CSGALNACT1Q8TDX6 532 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 CCDC51Q96ER9 411 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 JPH2Q9BR39 696 aaPredicted RBP10.2□□□□□ -0.78
SSBP1-212ENST00000489378 DUSP15Q9H1R2 295 aaPredicted RBP10.2□□□□□ -0.78
SSBP1-212ENST00000489378 CXCL16Q9H2A7 254 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 POLR3BQ9NW08 1133 aaPredicted RBP10.2□□□□□ -0.78
SSBP1-212ENST00000489378 MTRRQ9UBK8 725 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 PARP2Q9UGN5 583 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 NUP205Q92621 2012 aa10.2□□□□□ -0.78
SSBP1-212ENST00000489378 ARHGEF37A1IGU5 675 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 MYBPHLA2RUH7 354 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 FAM187AA6NFU0 413 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 HEPACAM2A8MVW5 462 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 SPECC1L-ADORA2AF8WAN1 911 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 B4GALT5O43286 388 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 CAVIN2O95810 425 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 GJA1P17302 382 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 ARF4P18085 180 aaPredicted RBP10.19□□□□□ -0.78
SSBP1-212ENST00000489378 FGFR3P22607 806 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 AXLP30530 894 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 CTHP32929 405 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 RPIAP49247 311 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 CREB5Q02930 508 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 CCINQ13939 588 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 PON2Q15165 354 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 AMHR2Q16671 573 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 PDXDC1Q6P996 788 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 BRICD5Q6PL45 260 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 B3GNT9Q6UX72 402 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 FERMT3Q86UX7 667 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 PROSER1Q86XN7 944 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 SMC5Q8IY18 1101 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 ZSCAN18Q8TBC5 510 aaPredicted RBP10.19□□□□□ -0.78
SSBP1-212ENST00000489378 SLC7A3Q8WY07 619 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 MSANTD3Q96H12 275 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 CCDC136Q96JN2 1154 aa10.19□□□□□ -0.78
SSBP1-212ENST00000489378 TRIM6Q9C030 488 aaPredicted RBP10.19□□□□□ -0.78
SSBP1-212ENST00000489378 DHX33Q9H6R0 707 aaKnown RBP10.19□□□□□ -0.78
SSBP1-212ENST00000489378 C8orf33Q9H7E9 229 aaPredicted RBP10.19□□□□□ -0.78
SSBP1-212ENST00000489378 RBM8AQ9Y5S9 174 aaKnown RBP10.19□□□□□ -0.78
SSBP1-212ENST00000489378 CCDC163A0A0D9SF12 145 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 ESYT2A0FGR8 921 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 BCLAF3A2AJT9 711 aaKnown RBP10.18□□□□□ -0.78
SSBP1-212ENST00000489378 INO80B-WBP1J3KQ70 363 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 CDX4O14627 284 aaPredicted RBP10.18□□□□□ -0.78
SSBP1-212ENST00000489378 ZNF197O14709 1029 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 DCLK1O15075 740 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 AKAP3O75969 853 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 MICAL2O94851 1124 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 NPTXRO95502 500 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 LRG1P02750 347 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 NUCB1Q02818 461 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 SPIRE1Q08AE8 756 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 ELAVL2Q12926 359 aaKnown RBP10.18□□□□□ -0.78
SSBP1-212ENST00000489378 RTN1Q16799 776 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 APOA5Q6Q788 366 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.18□□□□□ -0.78
SSBP1-212ENST00000489378 PDZD4Q76G19 769 aaPredicted RBP10.18□□□□□ -0.78
SSBP1-212ENST00000489378 SGMS1Q86VZ5 419 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 GPIHBP1Q8IV16 184 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 HACE1Q8IYU2 909 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 ADAM32Q8TC27 787 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 ZMYND12Q9H0C1 365 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 TRPV4Q9HBA0 871 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 TMEM9BQ9NQ34 198 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 RBM28Q9NW13 759 aaKnown RBP10.18□□□□□ -0.78
SSBP1-212ENST00000489378 SNTG2Q9NY99 539 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 ANKFY1Q9P2R3 1169 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 BRPF3Q9ULD4 1205 aa10.18□□□□□ -0.78
SSBP1-212ENST00000489378 FCF1Q9Y324 198 aaKnown RBP10.18□□□□□ -0.78
SSBP1-212ENST00000489378 KIF26AQ9ULI4 1882 aaPredicted RBP10.18□□□□□ -0.78
SSBP1-212ENST00000489378 PRRG1O14668 218 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 PTGESO14684 152 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 CHADO15335 359 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 EIF5BO60841 1220 aaKnown RBP10.17□□□□□ -0.78
SSBP1-212ENST00000489378 SEC24AO95486 1093 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 GSPT1P15170 499 aaKnown RBP10.17□□□□□ -0.78
SSBP1-212ENST00000489378 CHMLP26374 656 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 PTENP60484 403 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 PSMC5P62195 406 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 FGD1P98174 961 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms