RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 BEST2Q8NFU1 509 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 APBB2Q92870 758 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 KAT5Q92993 513 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 CCDC42Q96M95 316 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 PPP1R10Q96QC0 940 aaKnown RBP13.79□□□□□ -0.2
TOP3A-206ENST00000489131 PI4K2AQ9BTU6 479 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 IFIH1Q9BYX4 1025 aaKnown RBP13.79□□□□□ -0.2
TOP3A-206ENST00000489131 NIF3L1Q9GZT8 377 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-206ENST00000489131 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 DPP3Q9NY33 737 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 PPP2R2CQ9Y2T4 447 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 REXO2Q9Y3B8 237 aaKnown RBP13.79□□□□□ -0.2
TOP3A-206ENST00000489131 PIRO00625 290 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 PTGESO14684 152 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 NBNO60934 754 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 EOMESO95936 686 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 MYCP01106 439 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-206ENST00000489131 ITGB3P05106 788 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-206ENST00000489131 ITGA4P13612 1032 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 AKAP5P24588 427 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 ASPAP45381 313 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 KIF11P52732 1056 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 ZNF132P52740 706 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 KRT83P78385 493 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 PTK2Q05397 1052 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 BMS1Q14692 1282 aaKnown RBP13.78□□□□□ -0.2
TOP3A-206ENST00000489131 NAB2Q15742 525 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 SLC18A3Q16572 532 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 SCARA3Q6AZY7 606 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 AGMOQ6ZNB7 445 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 UBE2Q1Q7Z7E8 422 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 REXO1L1PQ8IX06 675 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 SLC30A5Q8TAD4 765 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 RSPH1Q8WYR4 309 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 PGBD4Q96DM1 585 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 ADAM2Q99965 735 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 HAUS4Q9H6D7 363 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 C11orf49Q9H6J7 331 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 CYP3A43Q9HB55 503 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 TRIP11Q15643 1979 aa13.78□□□□□ -0.2
TOP3A-206ENST00000489131 ZNF263O14978 683 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 PQBP1O60828 265 aaKnown RBP13.77□□□□□ -0.21
TOP3A-206ENST00000489131 CLCN1P35523 988 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 TLE2Q04725 743 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 ARHGAP44Q17R89 818 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 ZNF699Q32M78 642 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 TRIM60Q495X7 471 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 C10orf76Q5T2E6 689 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 SPOPLQ6IQ16 392 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 NYAP1Q6ZVC0 841 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 ZNF571Q7Z3V5 609 aaPredicted RBP13.77□□□□□ -0.21
TOP3A-206ENST00000489131 LIMS2Q7Z4I7 341 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 RTN4RL1Q86UN2 441 aaPredicted RBP13.77□□□□□ -0.21
TOP3A-206ENST00000489131 ECHDC2Q86YB7 292 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 TTC39CQ8N584 583 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 EPS8L1Q8TE68 723 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 DIS3LQ8TF46 1054 aaKnown RBP13.77□□□□□ -0.21
TOP3A-206ENST00000489131 LINC01599Q8WXQ3 324 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 PPP1R13BQ96KQ4 1090 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 CXCL16Q9H2A7 254 aa13.77□□□□□ -0.21
TOP3A-206ENST00000489131 ELAC1Q9H777 363 aaKnown RBP13.77□□□□□ -0.21
TOP3A-206ENST00000489131 NOCTQ9UK39 431 aaKnown RBP13.77□□□□□ -0.21
TOP3A-206ENST00000489131 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 USP27XA6NNY8 438 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 IPO7O95373 1038 aaKnown RBP13.76□□□□□ -0.21
TOP3A-206ENST00000489131 TUBB4AP04350 444 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 FAM163BP0C2L3 166 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 PAX3P23760 479 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 POLR2BP30876 1174 aaKnown RBP13.76□□□□□ -0.21
TOP3A-206ENST00000489131 RFC2P35250 354 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 PNPLA4P41247 253 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 BPIFB4P59827 614 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 YWHAEP62258 255 aaKnown RBP13.76□□□□□ -0.21
TOP3A-206ENST00000489131 TDRD12Q587J7 1177 aaKnown RBP13.76□□□□□ -0.21
TOP3A-206ENST00000489131 ZNF667Q5HYK9 610 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 C9orf57Q5W0N0 161 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 VPS36Q86VN1 386 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 ZNF677Q86XU0 584 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 DDX1Q92499 740 aaKnown RBP13.76□□□□□ -0.21
TOP3A-206ENST00000489131 HPDLQ96IR7 371 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 ARID3AQ99856 593 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 WNT8AQ9H1J5 351 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 HIPK3Q9H422 1215 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 GDAP2Q9NXN4 497 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 TUBGCP4Q9UGJ1 667 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
TOP3A-206ENST00000489131 A0A087X0T9 212 aa13.75□□□□□ -0.21
TOP3A-206ENST00000489131 ARL5CA6NH57 179 aa13.75□□□□□ -0.21
TOP3A-206ENST00000489131 PJA2O43164 708 aa13.75□□□□□ -0.21
TOP3A-206ENST00000489131 AKR1B10O60218 316 aa13.75□□□□□ -0.21
TOP3A-206ENST00000489131 FAM228BP0C875 321 aa13.75□□□□□ -0.21
TOP3A-206ENST00000489131 PNMA6AP0CW24 399 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-206ENST00000489131 P4HA1P13674 534 aa13.75□□□□□ -0.21
TOP3A-206ENST00000489131 CYP11B1P15538 503 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms