RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TMEM191CA6NGB0 347 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 F2RL2O00254 374 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 RAMP2O60895 175 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 SLC43A1O75387 559 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 ALDH1L1O75891 902 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 GPANK1O95872 356 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 HLA-DOAP06340 250 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 PDGFRBP09619 1106 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 EGR2P11161 476 aaPredicted RBP4.85□□□□□ -1.63
RFC4-213ENST00000489028 MTHFD1P11586 935 aaKnown RBP4.85□□□□□ -1.63
RFC4-213ENST00000489028 MALP21145 153 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 MCL1Q07820 350 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 UTP14CQ5TAP6 766 aaKnown RBP4.85□□□□□ -1.63
RFC4-213ENST00000489028 HECTD2Q5U5R9 776 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 PPP4R3AQ6IN85 833 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 TMIEQ8NEW7 156 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 GPR150Q8NGU9 434 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 FUBP1Q96AE4 644 aaKnown RBP4.85□□□□□ -1.63
RFC4-213ENST00000489028 HSPBAP1Q96EW2 488 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 KLHL32Q96NJ5 620 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 GTPBP4Q9BZE4 634 aaKnown RBP4.85□□□□□ -1.63
RFC4-213ENST00000489028 TCF7L1Q9HCS4 588 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 AASDHPPTQ9NRN7 309 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 JKAMPQ9P055 326 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 IP6K2Q9UHH9 426 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 KCNE5Q9UJ90 142 aa4.85□□□□□ -1.63
RFC4-213ENST00000489028 WDR33Q9C0J8 1336 aaKnown RBP4.85□□□□□ -1.63
RFC4-213ENST00000489028 B3GALT2O43825 422 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 ABLIM3O94929 683 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 IL33O95760 270 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 POU2F2P09086 479 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 IGBP1P78318 339 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 TTF1Q15361 905 aaPredicted RBP4.84□□□□□ -1.63
RFC4-213ENST00000489028 CYP2A13Q16696 494 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 ATP2B3Q16720 1220 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 GEN1Q17RS7 908 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 SLC4A10Q6U841 1118 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.84□□□□□ -1.63
RFC4-213ENST00000489028 USP45Q70EL2 814 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 ZNF365Q70YC5 407 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 TTC7BQ86TV6 843 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 NLGN4YQ8NFZ3 816 aaPredicted RBP4.84□□□□□ -1.63
RFC4-213ENST00000489028 LINC00476Q8WZB0 136 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 BOD1Q96IK1 185 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 PACSIN1Q9BY11 444 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 RTFDC1Q9BY42 306 aaPredicted RBP4.84□□□□□ -1.63
RFC4-213ENST00000489028 SLITRK6Q9H5Y7 841 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 TMEM74BQ9NUR3 256 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 PCDHA3Q9Y5H8 950 aa4.84□□□□□ -1.63
RFC4-213ENST00000489028 EPN1Q9Y6I3 576 aaPredicted RBP4.84□□□□□ -1.63
RFC4-213ENST00000489028 PRSS29PA6NIE9 313 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 E9PLN8 166 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 FOSP01100 380 aaPredicted RBP4.83□□□□□ -1.64
RFC4-213ENST00000489028 GCP02774 474 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 PF4V1P10720 104 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 ITGAMP11215 1152 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 FOXI1Q12951 378 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 CRB2Q5IJ48 1285 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 RAVER1Q8IY67 606 aaKnown RBP4.83□□□□□ -1.64
RFC4-213ENST00000489028 LRIG1Q96JA1 1093 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 PNKPQ96T60 521 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 VKORC1Q9BQB6 163 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 RHOBTB2Q9BYZ6 727 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 UNKLQ9H9P5 680 aaKnown RBP4.83□□□□□ -1.64
RFC4-213ENST00000489028 GALNT9Q9HCQ5 603 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 CTTNBP2NLQ9P2B4 639 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 CDYLQ9Y232 598 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 NOX1Q9Y5S8 564 aa4.83□□□□□ -1.64
RFC4-213ENST00000489028 SUV39H1O43463 412 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 TGM1P22735 817 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 MAP2K6P52564 334 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 VAV2P52735 878 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 NOGQ13253 232 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 SPDYE7PQ495Y7 208 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 ABHD17BQ5VST6 288 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 ARMC6Q6NXE6 501 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 FAM90A1Q86YD7 464 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 LCORLQ8N3X6 602 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 PDPRQ8NCN5 879 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 NSUN7Q8NE18 718 aaKnown RBP4.82□□□□□ -1.64
RFC4-213ENST00000489028 RGMAQ96B86 450 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 C1orf43Q9BWL3 253 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 CYP4F11Q9HBI6 524 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 MRPS18AQ9NVS2 196 aaKnown RBP4.82□□□□□ -1.64
RFC4-213ENST00000489028 RNF181Q9P0P0 153 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 PACSIN3Q9UKS6 424 aa4.82□□□□□ -1.64
RFC4-213ENST00000489028 THRAP3Q9Y2W1 955 aaKnown RBP4.82□□□□□ -1.64
RFC4-213ENST00000489028 MTO1Q9Y2Z2 717 aaKnown RBP4.82□□□□□ -1.64
RFC4-213ENST00000489028 SALL3Q9BXA9 1300 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 AKAP10O43572 662 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 ERN1O75460 977 aaKnown RBP4.81□□□□□ -1.64
RFC4-213ENST00000489028 TYRP1P17643 537 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 PRDX5P30044 214 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 PLA2G5P39877 138 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 RAB27AP51159 221 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 HK3P52790 923 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 SEC24CP53992 1094 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 MXRA7P84157 204 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 MC2RQ01718 297 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms