RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 UVSSAQ2YD98 709 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 ZNF699Q32M78 642 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 GBP6Q6ZN66 633 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 C15orf39Q6ZRI6 1047 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 COLGALT2Q8IYK4 626 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 FBXL13Q8NEE6 735 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 SEMA4DQ92854 862 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 UROC1Q96N76 676 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 NAP1L5Q96NT1 182 aaPredicted RBP13.27□□□□□ -0.29
TRAIP-209ENST00000488860 PI4K2AQ9BTU6 479 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 LSM14BQ9BX40 385 aaKnown RBP13.27□□□□□ -0.29
TRAIP-209ENST00000488860 IMPG2Q9BZV3 1241 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 TRIM5Q9C035 493 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 XPO4Q9C0E2 1151 aaKnown RBP13.27□□□□□ -0.29
TRAIP-209ENST00000488860 INTS2Q9H0H0 1204 aaKnown RBP13.27□□□□□ -0.29
TRAIP-209ENST00000488860 CWH43Q9H720 699 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 GRPEL1Q9HAV7 217 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
TRAIP-209ENST00000488860 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.27□□□□□ -0.29
TRAIP-209ENST00000488860 NT5C1B-RDH14C9J2C7 533 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 F8W810 466 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 P4HA2O15460 535 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 AP5Z1O43299 807 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 KIF4AO95239 1232 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 CST3P01034 146 aaPredicted RBP13.26□□□□□ -0.29
TRAIP-209ENST00000488860 LAG3P18627 525 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 BCAR1P56945 870 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 LRMPQ12912 555 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 GSE1Q14687 1217 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 EXOC3L4Q17RC7 722 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 SV2CQ496J9 727 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 SPOPLQ6IQ16 392 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 SCARA5Q6ZMJ2 495 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 DDX27Q96GQ7 796 aaKnown RBP13.26□□□□□ -0.29
TRAIP-209ENST00000488860 HPDLQ96IR7 371 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 ZNF558Q96NG5 402 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 RAB20Q9NX57 234 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 FAN1Q9Y2M0 1017 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 NUB1Q9Y5A7 615 aa13.26□□□□□ -0.29
TRAIP-209ENST00000488860 ANO9A1A5B4 782 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 FSD2A1L4K1 749 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 NRP1O14786 923 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 LRRN2O75325 713 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 B3GAT3O94766 335 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 CA3P07451 260 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 RPL9P32969 192 aaKnown RBP13.25□□□□□ -0.29
TRAIP-209ENST00000488860 TAF6P49848 677 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 KLK7P49862 253 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 MCCD1P59942 119 aaPredicted RBP13.25□□□□□ -0.29
TRAIP-209ENST00000488860 TNNC1P63316 161 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 NOP14P78316 857 aaKnown RBP13.25□□□□□ -0.29
TRAIP-209ENST00000488860 MYO1EQ12965 1108 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 SYCP1Q15431 976 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 UPP1Q16831 310 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 WDR44Q5JSH3 913 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 SARM1Q6SZW1 724 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 LRRC52Q8N7C0 313 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 COLGALT1Q8NBJ5 622 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 C3orf58Q8NDZ4 430 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 SP7Q8TDD2 431 aaPredicted RBP13.25□□□□□ -0.29
TRAIP-209ENST00000488860 ATG2AQ2TAZ0 1938 aa13.25□□□□□ -0.29
TRAIP-209ENST00000488860 LAMA2P24043 3122 aaKnown RBP13.24□□□□□ -0.29
TRAIP-209ENST00000488860 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
TRAIP-209ENST00000488860 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
TRAIP-209ENST00000488860 GTPBP10A4D1E9 387 aaKnown RBP13.24□□□□□ -0.29
TRAIP-209ENST00000488860 LRRC10BA6NIK2 292 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 I3L4J1 428 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 PIRO00625 290 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 TADA2AO75478 443 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 ALDH2P05091 517 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 ITGB1P05556 798 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 GALTP07902 379 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 SLC9A1P19634 815 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 IGFBP6P24592 240 aaPredicted RBP13.24□□□□□ -0.29
TRAIP-209ENST00000488860 ATICP31939 592 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 CTNNB1P35222 781 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 PBX2P40425 430 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 PNPLA4P41247 253 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 BRCC3P46736 316 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 ALDH7A1P49419 539 aaKnown RBP13.24□□□□□ -0.29
TRAIP-209ENST00000488860 APBA1Q02410 837 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 SGSM1Q2NKQ1 1148 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 ZNF667Q5HYK9 610 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 TRIM65Q6PJ69 517 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 DSTYKQ6XUX3 929 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 EHBP1Q8NDI1 1231 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 CXorf38Q8TB03 319 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 NT5C1BQ96P26 610 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 NKX2-4Q9H2Z4 354 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 AAASQ9NRG9 546 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 FAM207AQ9NSI2 230 aaPredicted RBP13.24□□□□□ -0.29
TRAIP-209ENST00000488860 MARCH5Q9NX47 278 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 NXF1Q9UBU9 619 aaKnown RBP13.24□□□□□ -0.29
TRAIP-209ENST00000488860 MSRAQ9UJ68 235 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 POLIQ9UNA4 740 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms