RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 BACE2Q9Y5Z0 518 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 ANO9A1A5B4 782 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 SYN3O14994 580 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 RFPL2O75678 378 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 SYKP43405 635 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 ATAT1Q5SQI0 421 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 ANKS3Q6ZW76 656 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 STXBP4Q6ZWJ1 553 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 FSIP1Q8NA03 581 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 KREMEN2Q8NCW0 462 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 ZNF707Q96C28 371 aaPredicted RBP17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 SAAL1Q96ER3 474 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 NECTIN4Q96NY8 510 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 FAM213AQ9BRX8 229 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 EPHX3Q9H6B9 360 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 NUB1Q9Y5A7 615 aa17.31■□□□□ 0.36
CTDSP1-209ENST00000488627 PI4K2BG5E9Z4 385 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 M0QZQ0 153 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 PIRO00625 290 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 XPOTO43592 962 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 EXTL3O43909 919 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 LDHAP00338 332 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 OR1D2P34982 312 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 MTHFRP42898 656 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 TMEM132DQ14C87 1099 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 BMT2Q1RMZ1 405 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 VARS2Q5ST30 1063 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 C9orf57Q5W0N0 161 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 SLC8B1Q6J4K2 584 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 C15orf39Q6ZRI6 1047 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 BRSK2Q8IWQ3 736 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 EFCAB13Q8IY85 973 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 BEST2Q8NFU1 509 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 RPGRIP1Q96KN7 1286 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 RIPOR3Q96MK2 946 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 RHOBTB2Q9BYZ6 727 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 PCIF1Q9H4Z3 704 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 DPP7Q9UHL4 492 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 FBXW11Q9UKB1 542 aa17.3■□□□□ 0.36
CTDSP1-209ENST00000488627 CCDC195A0A1B0GUA6 201 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 GOLGA8IPA6NC78 632 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 GOLGA8JA6NMD2 632 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 SPTLC1O15269 473 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 IL18RAPO95256 599 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 MCM4P33991 863 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 LILRA4P59901 499 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 STK4Q13043 487 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 ARMCX5Q6P1M9 558 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 RNF135Q8IUD6 432 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 PCDHB8Q9UN66 801 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 CDY1Q9Y6F8 540 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 TRIP11Q15643 1979 aa17.29■□□□□ 0.36
CTDSP1-209ENST00000488627 KIAA0391O15091 583 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 ZMYND10O75800 440 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 ZNF202O95125 648 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 MYL1P05976 194 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 KMT5BQ4FZB7 885 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 CYP26C1Q6V0L0 522 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 NT5DC4Q86YG4 428 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 GPD1LQ8N335 351 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 KIAA0895Q8NCT3 520 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 CXorf38Q8TB03 319 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 AGPAT3Q9NRZ7 376 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 ZDHHC7Q9NXF8 308 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 DPP3Q9NY33 737 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
CTDSP1-209ENST00000488627 UBE4BO95155 1302 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 ABLIM3O94929 683 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 OAZ2O95190 189 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 PRR29P0C7W0 189 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 SNRPFP62306 86 aaKnown RBP17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 SCARA3Q6AZY7 606 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 CBWD2Q8IUF1 395 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 NELFCDQ8IXH7 590 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 APPL2Q8NEU8 664 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 BORCS6Q96GS4 357 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 PRKD2Q9BZL6 878 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 PDE11AQ9HCR9 933 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 RBAKQ9NYW8 714 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 HSPBP1Q9NZL4 362 aa17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 TIMM13Q9Y5L4 95 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-209ENST00000488627 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 C2CD4DB7Z1M9 353 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 H7C4K7 107 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 PAX3P23760 479 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 ROR1Q01973 937 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 DPYDQ12882 1025 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 PSMD2Q13200 908 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 KNOP1Q1ED39 458 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 ELMSAN1Q6PJG2 1045 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 FMR1NBQ8N0W7 255 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 ENGASEQ8NFI3 743 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 ZNF461Q8TAF7 563 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 FAM84AQ96KN4 292 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 SENP8Q96LD8 212 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 WDR6Q9NNW5 1121 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 C11orf16Q9NQ32 467 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 USTQ9Y2C2 406 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms