RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CHRDQ9H2X0 955 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 ARHGAP28Q9P2N2 729 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 NOL7Q9UMY1 257 aaKnown RBP20.85■□□□□ 0.93
GGPS1-206ENST00000488594 FRYLO94915 3013 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 SEC24AO95486 1093 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 PSMC3P17980 439 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 PROZP22891 400 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 ST3GAL1Q11201 340 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 GNL2Q13823 731 aaKnown RBP20.85■□□□□ 0.93
GGPS1-206ENST00000488594 MPZL3Q6UWV2 235 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 DEPDC1BQ8WUY9 529 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 TCEAL4Q96EI5 215 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 ZNF512Q96ME7 567 aaPredicted RBP20.85■□□□□ 0.93
GGPS1-206ENST00000488594 LLPHQ9BRT6 129 aaKnown RBP20.85■□□□□ 0.93
GGPS1-206ENST00000488594 TARS2Q9BW92 718 aaKnown RBP20.85■□□□□ 0.93
GGPS1-206ENST00000488594 KMT5AQ9NQR1 393 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 AFF4Q9UHB7 1163 aaKnown RBP20.85■□□□□ 0.93
GGPS1-206ENST00000488594 GMEB2Q9UKD1 530 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 CDV3Q9UKY7 258 aaKnown RBP20.85■□□□□ 0.93
GGPS1-206ENST00000488594 DNM3Q9UQ16 869 aa20.85■□□□□ 0.93
GGPS1-206ENST00000488594 NCOR2Q9Y618 2525 aa20.84■□□□□ 0.93
GGPS1-206ENST00000488594 MAP4K3Q8IVH8 894 aa20.84■□□□□ 0.93
GGPS1-206ENST00000488594 C4orf32Q8N8J7 132 aa20.84■□□□□ 0.93
GGPS1-206ENST00000488594 FBXO18Q8NFZ0 1043 aa20.84■□□□□ 0.93
GGPS1-206ENST00000488594 SNX29Q8TEQ0 813 aa20.84■□□□□ 0.93
GGPS1-206ENST00000488594 FAM3CQ92520 227 aa20.84■□□□□ 0.93
GGPS1-206ENST00000488594 ZNF334Q9HCZ1 680 aaPredicted RBP20.84■□□□□ 0.93
GGPS1-206ENST00000488594 KCNG1Q9UIX4 513 aa20.84■□□□□ 0.93
GGPS1-206ENST00000488594 NDRG2Q9UN36 371 aaKnown RBP20.84■□□□□ 0.93
GGPS1-206ENST00000488594 HIP1RO75146 1068 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 MCM4P33991 863 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 CCR2P41597 374 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 CCR3P51677 355 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 EPHA5P54756 1037 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 DAW1Q8N136 415 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 IGSF22Q8N9C0 903 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 TIPINQ9BVW5 301 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 GPR88Q9GZN0 384 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 TRPV4Q9HBA0 871 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 ASAH2Q9NR71 780 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 RAB23Q9ULC3 237 aa20.83■□□□□ 0.92
GGPS1-206ENST00000488594 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.83■□□□□ 0.92
GGPS1-206ENST00000488594 ABLIM1O14639 778 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 TDGF1P13385 188 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 GDI1P31150 447 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 ATXN1P54253 815 aaKnown RBP20.82■□□□□ 0.92
GGPS1-206ENST00000488594 MLLT6P55198 1093 aaPredicted RBP20.82■□□□□ 0.92
GGPS1-206ENST00000488594 TWF1Q12792 350 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 KRT79Q5XKE5 535 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 C1orf228Q6PIY5 440 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 VITQ6UXI7 678 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 TAS1R3Q7RTX0 852 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 CELF5Q8N6W0 485 aaKnown RBP20.82■□□□□ 0.92
GGPS1-206ENST00000488594 DDX12PQ92771 950 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 E2F7Q96AV8 911 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 C18orf25Q96B23 403 aaPredicted RBP20.82■□□□□ 0.92
GGPS1-206ENST00000488594 MSANTD3Q96H12 275 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 ZSWIM3Q96MP5 696 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 TBC1D32Q96NH3 1257 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 NTPCRQ9BSD7 190 aaKnown RBP20.82■□□□□ 0.92
GGPS1-206ENST00000488594 OXCT2Q9BYC2 517 aaPredicted RBP20.82■□□□□ 0.92
GGPS1-206ENST00000488594 USP18Q9UMW8 372 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 PCDHB8Q9UN66 801 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 LIMCH1Q9UPQ0 1083 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 PIAS3Q9Y6X2 628 aa20.82■□□□□ 0.92
GGPS1-206ENST00000488594 ZNF263O14978 683 aa20.81■□□□□ 0.92
GGPS1-206ENST00000488594 TOM1L1O75674 476 aa20.81■□□□□ 0.92
GGPS1-206ENST00000488594 CPB1P15086 417 aa20.81■□□□□ 0.92
GGPS1-206ENST00000488594 MARCKSP29966 332 aaPredicted RBP20.81■□□□□ 0.92
GGPS1-206ENST00000488594 HMGN5P82970 282 aaKnown RBP20.81■□□□□ 0.92
GGPS1-206ENST00000488594 STRN3Q13033 797 aa20.81■□□□□ 0.92
GGPS1-206ENST00000488594 ZSCAN18Q8TBC5 510 aaPredicted RBP20.81■□□□□ 0.92
GGPS1-206ENST00000488594 RTKNQ9BST9 563 aa20.81■□□□□ 0.92
GGPS1-206ENST00000488594 LMAN1LQ9HAT1 526 aa20.81■□□□□ 0.92
GGPS1-206ENST00000488594 CEP72Q9P209 647 aa20.81■□□□□ 0.92
GGPS1-206ENST00000488594 E9PMD0 336 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 LAD1O00515 517 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 MOSPD3O75425 235 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 MYL4P12829 197 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 TGM1P22735 817 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 MAPK7Q13164 816 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 PLD1Q13393 1074 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 RINT1Q6NUQ1 792 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 C1orf186Q6ZWK4 172 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 MFSD6LQ8IWD5 586 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 CCDC83Q8IWF9 413 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 HS6ST3Q8IZP7 471 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 SPIRE2Q8WWL2 714 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 RUSC1Q9BVN2 902 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 PLEKHA5Q9HAU0 1116 aa20.8■□□□□ 0.92
GGPS1-206ENST00000488594 F5P12259 2224 aa20.79■□□□□ 0.92
GGPS1-206ENST00000488594 SLC16A4O15374 487 aa20.79■□□□□ 0.92
GGPS1-206ENST00000488594 HARSP12081 509 aaKnown RBP20.79■□□□□ 0.92
GGPS1-206ENST00000488594 VIPR2P41587 438 aa20.79■□□□□ 0.92
GGPS1-206ENST00000488594 YWHAHQ04917 246 aaPredicted RBP20.79■□□□□ 0.92
GGPS1-206ENST00000488594 PTGDRQ13258 359 aa20.79■□□□□ 0.92
GGPS1-206ENST00000488594 NOLC1Q14978 699 aaKnown RBP eCLIP20.79■□□□□ 0.92
GGPS1-206ENST00000488594 SLC10A6Q3KNW5 377 aa20.79■□□□□ 0.92
GGPS1-206ENST00000488594 LAIR1Q6GTX8 287 aa20.79■□□□□ 0.92
GGPS1-206ENST00000488594 ZPBP2Q6X784 338 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms