RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 KIAA0753Q2KHM9 967 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 COBLL1Q53SF7 1204 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 DCAF17Q5H9S7 520 aaPredicted RBP7.53□□□□□ -1.2
RTN4-214ENST00000486085 CYB5RLQ6IPT4 315 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 FAM90A1Q86YD7 464 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 SYT12Q8IV01 421 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 CCDC146Q8IYE0 955 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 EDAQ92838 391 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 TNPO1Q92973 898 aaKnown RBP7.53□□□□□ -1.2
RTN4-214ENST00000486085 TTC17Q96AE7 1141 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 MRPL46Q9H2W6 279 aaKnown RBP7.53□□□□□ -1.2
RTN4-214ENST00000486085 SIDT1Q9NXL6 827 aaKnown RBP7.53□□□□□ -1.2
RTN4-214ENST00000486085 PCDHA6Q9UN73 950 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 L1RE1Q9UN81 338 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 SYNJ2O15056 1496 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 CFAP69A5D8W1 941 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 SLC43A1O75387 559 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 AHSGP02765 367 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 ITGB1P05556 798 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 RHCEP18577 417 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 MGAT1P26572 445 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 PIK3CGP48736 1102 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 MAN2A2P49641 1150 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 GPSM2P81274 684 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 RHDQ02161 417 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 CRHR2Q13324 411 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 CNGB1Q14028 1251 aaPredicted RBP7.52□□□□□ -1.21
RTN4-214ENST00000486085 CCDC93Q567U6 631 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 KHDC1LQ5JSQ8 128 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 UTP14CQ5TAP6 766 aaKnown RBP7.52□□□□□ -1.21
RTN4-214ENST00000486085 SWSAP1Q6NVH7 229 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 MAEAQ7L5Y9 396 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 CELF5Q8N6W0 485 aaKnown RBP7.52□□□□□ -1.21
RTN4-214ENST00000486085 TBC1D15Q8TC07 691 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 BRIX1Q8TDN6 353 aaKnown RBP7.52□□□□□ -1.21
RTN4-214ENST00000486085 C8orf49Q96NF6 230 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 BRD9Q9H8M2 597 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 ZMAT3Q9HA38 289 aaKnown RBP7.52□□□□□ -1.21
RTN4-214ENST00000486085 SARS2Q9NP81 518 aaKnown RBP7.52□□□□□ -1.21
RTN4-214ENST00000486085 SMPD4Q9NXE4 827 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 FAM30AQ9NZY2 134 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 SLC45A2Q9UMX9 530 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 RUSC2Q8N2Y8 1516 aa7.52□□□□□ -1.21
RTN4-214ENST00000486085 KLRG2A4D1S0 409 aaPredicted RBP7.51□□□□□ -1.21
RTN4-214ENST00000486085 CDHR4A6H8M9 788 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 GOLGA6L6A8MZA4 724 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 LEFTY2O00292 366 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 HAUS5O94927 633 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 PRSS23O95084 383 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 MYL1P05976 194 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 GNAI3P08754 354 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 SELENOPP49908 381 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 PTTG1IPP53801 180 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 GNAI1P63096 354 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 RRP1BQ14684 758 aaKnown RBP7.51□□□□□ -1.21
RTN4-214ENST00000486085 MAP9Q49MG5 647 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 RNF220Q5VTB9 566 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 DARS2Q6PI48 645 aaKnown RBP7.51□□□□□ -1.21
RTN4-214ENST00000486085 FITM2Q8N6M3 262 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 SARGQ9BW04 601 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 KLC2Q9H0B6 622 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 BHMT2Q9H2M3 363 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 ARNT2Q9HBZ2 717 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 JKAMPQ9P055 326 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 CNOT11Q9UKZ1 510 aaKnown RBP7.51□□□□□ -1.21
RTN4-214ENST00000486085 XDHP47989 1333 aa7.51□□□□□ -1.21
RTN4-214ENST00000486085 SNAPC4Q5SXM2 1469 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 RAPGEF2Q9Y4G8 1499 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 CARMIL1Q5VZK9 1371 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 A0A1W2PPL8 197 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 AGFG2O95081 481 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 HRGP04196 525 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 APOBEC3AP31941 199 aaPredicted RBP7.5□□□□□ -1.21
RTN4-214ENST00000486085 CACNB3P54284 484 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 PSMC1P62191 440 aaKnown RBP7.5□□□□□ -1.21
RTN4-214ENST00000486085 NOMO3P69849 1222 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 FAM193AP78312 1265 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 NHLH2Q02577 135 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 PRKD1Q15139 912 aaPredicted RBP7.5□□□□□ -1.21
RTN4-214ENST00000486085 CCSAPQ6IQ19 270 aaPredicted RBP7.5□□□□□ -1.21
RTN4-214ENST00000486085 FAM43AQ8N2R8 423 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 TTC9BQ8N6N2 239 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 ATP6V0A4Q9HBG4 840 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 DDX21Q9NR30 783 aaKnown RBP eCLIP7.5□□□□□ -1.21
RTN4-214ENST00000486085 CNNM1Q9NRU3 951 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 EIF2B4Q9UI10 523 aaKnown RBP7.5□□□□□ -1.21
RTN4-214ENST00000486085 PCDHGB6Q9Y5F9 930 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 NUP160Q12769 1436 aa7.5□□□□□ -1.21
RTN4-214ENST00000486085 PRSS29PA6NIE9 313 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 PHGDHO43175 533 aaKnown RBP7.49□□□□□ -1.21
RTN4-214ENST00000486085 MATN4O95460 622 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 GJB1P08034 283 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 KITP10721 976 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 TRIM27P14373 513 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 HDCP19113 662 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 RNASE9P60153 205 aaKnown RBP7.49□□□□□ -1.21
RTN4-214ENST00000486085 PURAQ00577 322 aaKnown RBP7.49□□□□□ -1.21
RTN4-214ENST00000486085 EXOSC9Q06265 439 aaKnown RBP7.49□□□□□ -1.21
RTN4-214ENST00000486085 NAIF1Q69YI7 327 aaPredicted RBP7.49□□□□□ -1.21
RTN4-214ENST00000486085 ZNF365Q70YC5 407 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms