RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 MSLNLQ96KJ4 702 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 PYM1Q9BRP8 204 aaKnown RBP5.12□□□□□ -1.59
PTCD3-214ENST00000483925 CHCHD6Q9BRQ6 235 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 CNPPD1Q9BV87 410 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 STK31Q9BXU1 1019 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SEMA4AQ9H3S1 761 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 POFUT1Q9H488 388 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 RETREG1Q9H6L5 497 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 BRD9Q9H8M2 597 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ARMT1Q9H993 441 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ZMAT3Q9HA38 289 aaKnown RBP5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SLC6A20Q9NP91 592 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 OBP2BQ9NPH6 170 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 CNNM1Q9NRU3 951 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 TM7SF3Q9NS93 570 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ANKEF1Q9NU02 776 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 GGA3Q9NZ52 723 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 A0A087X0M5 115 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 CCDC196A0A1B0GTZ2 297 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 A0A1B0GX30 115 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 C9orf118A6NHY6 69 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 H3BUI4 141 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 ACKR2O00590 384 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 NPC1O15118 1278 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 FOXP2O15409 715 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 TIPRLO75663 272 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 SOAT2O75908 522 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 MYCLP12524 364 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-214ENST00000483925 BRAFP15056 766 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 ADD2P35612 726 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 STAT5AP42229 794 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 DSC2Q02487 901 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 EFR3AQ14156 821 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 ADCK5Q3MIX3 580 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 C3orf36Q3SXR2 165 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 TTC38Q5R3I4 469 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 CATSPEREQ5SY80 951 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 GPATCH4Q5T3I0 446 aaKnown RBP5.11□□□□□ -1.59
PTCD3-214ENST00000483925 MFSD4BQ5TF39 518 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 MROH9Q5TGP6 573 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 FAM180AQ6UWF9 173 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 TMCO3Q6UWJ1 677 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 LMBR1LQ6UX01 489 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 LIMS2Q7Z4I7 341 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 RTN4RL1Q86UN2 441 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-214ENST00000483925 ZSCAN30Q86W11 494 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 NLRP10Q86W26 655 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 COL23A1Q86Y22 540 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-214ENST00000483925 RIOX2Q8IUF8 465 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 FAM126BQ8IXS8 530 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 TSPYL6Q8N831 410 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 C3orf20Q8ND61 904 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 OR14C36Q8NHC7 312 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 PLBD2Q8NHP8 589 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 UHMK1Q8TAS1 419 aaKnown RBP5.11□□□□□ -1.59
PTCD3-214ENST00000483925 TSPEARQ8WU66 669 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 TIGD1Q96MW7 591 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 NT5C1BQ96P26 610 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 TUBGCP5Q96RT8 1024 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 ADI1Q9BV57 179 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 BRIP1Q9BX63 1249 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 SENP6Q9GZR1 1112 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-214ENST00000483925 VPS45Q9NRW7 570 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 SLC39A10Q9ULF5 831 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 X6R8D5 127 aa5.11□□□□□ -1.59
PTCD3-214ENST00000483925 FSD2A1L4K1 749 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 LGALS16A8MUM7 142 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 MYO1FO00160 1098 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 ELL2O00472 640 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-214ENST00000483925 LAMTOR5O43504 91 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 PRPF6O94906 941 aaKnown RBP5.1□□□□□ -1.59
PTCD3-214ENST00000483925 APOL3O95236 402 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 TBX18O95935 607 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 CKMT1AP12532 417 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 GSPT1P15170 499 aaKnown RBP5.1□□□□□ -1.59
PTCD3-214ENST00000483925 NKX3-2P78367 333 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 NKX6-1P78426 367 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-214ENST00000483925 PFKPQ01813 784 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 ROR1Q01973 937 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 TUSC3Q13454 348 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 TRPC3Q13507 836 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 PTK2BQ14289 1009 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 ADRM1Q16186 407 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 FAM110CQ1W6H9 321 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 CCDC92Q53HC0 331 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-214ENST00000483925 ZBTB41Q5SVQ8 909 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 PRAMEF18Q5VWM3 479 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 JMJD6Q6NYC1 403 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-214ENST00000483925 KCTD1Q719H9 257 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 FANCBQ8NB91 859 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 PIP4K2CQ8TBX8 421 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 UCMAQ8WVF2 138 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 RUBCNQ92622 972 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 SLC35A4Q96G79 324 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 MAELQ96JY0 434 aaKnown RBP5.1□□□□□ -1.59
PTCD3-214ENST00000483925 HEPHQ9BQS7 1158 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 MYL10Q9BUA6 226 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 CD244Q9BZW8 370 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 CCDC68Q9H2F9 335 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 GREM2Q9H772 168 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms