RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 GPR62Q9BZJ7 368 aa10.85□□□□□ -0.67
SPTLC1-206ENST00000482632 PLEKHA5Q9HAU0 1116 aa10.85□□□□□ -0.67
SPTLC1-206ENST00000482632 RBAKQ9NYW8 714 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1-206ENST00000482632 STK39Q9UEW8 545 aa10.85□□□□□ -0.67
SPTLC1-206ENST00000482632 CPSF3Q9UKF6 684 aaKnown RBP10.85□□□□□ -0.67
SPTLC1-206ENST00000482632 BARX2Q9UMQ3 279 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1-206ENST00000482632 UBQLN1Q9UMX0 589 aaKnown RBP10.85□□□□□ -0.67
SPTLC1-206ENST00000482632 MAPK8IP1Q9UQF2 711 aa10.85□□□□□ -0.67
SPTLC1-206ENST00000482632 TRANK1O15050 2925 aa10.85□□□□□ -0.67
SPTLC1-206ENST00000482632 SCN1AP35498 2009 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 TTC26A0AVF1 554 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 C2orf71A6NGG8 1288 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 MEFVO15553 781 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 NCK2O43639 380 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 PRPF40AO75400 957 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 IL18RAPO95256 599 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 SMC2O95347 1197 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 NFICP08651 508 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 KCNQ1P51787 676 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 RBM10P98175 930 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 TFAMQ00059 246 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 ELAVL2Q12926 359 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 STK4Q13043 487 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 PSMD2Q13200 908 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 PTPN14Q15678 1187 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 NAB2Q15742 525 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 DUSP6Q16828 381 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 KNOP1Q1ED39 458 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 AAK1Q2M2I8 961 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 DCLRE1AQ6PJP8 1040 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 PRSS55Q6UWB4 352 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 ALKAL1Q6UXT8 129 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 EPM2AIP1Q7L775 607 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 MRPL43Q8N983 215 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 KIAA0895Q8NCT3 520 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 ZNF507Q8TCN5 953 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 SCFD1Q8WVM8 642 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 SMARCE1Q969G3 411 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 TMUB1Q9BVT8 246 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 HSPBP1Q9NZL4 362 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 SSX2IPQ9Y2D8 614 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 STYXL1Q9Y6J8 313 aa10.84□□□□□ -0.67
SPTLC1-206ENST00000482632 BDP1A6H8Y1 2624 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 TRAPPC3O43617 180 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 EXTL3O43909 919 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 FAM189A1O60320 539 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 CLASP2O75122 1294 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 TBX10O75333 385 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 KIF20AO95235 890 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 TMEM191BP0C7N4 346 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 RPL17P18621 184 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 IGFBP6P24592 240 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 RPL9P32969 192 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 HOXD13P35453 343 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 UBE2HP62256 183 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 EHHADHQ08426 723 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 SNW1Q13573 536 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 PSMD5Q16401 504 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 UPP1Q16831 310 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 XKR4Q5GH76 650 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 LMBRD2Q68DH5 695 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 ISM2Q6H9L7 571 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 DSTYKQ6XUX3 929 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 BRSK2Q8IWQ3 736 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 CD302Q8IX05 232 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 EFHBQ8N7U6 833 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 C3orf58Q8NDZ4 430 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 CDCA3Q99618 268 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 TTPALQ9BTX7 342 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 REPIN1Q9BWE0 567 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 PDE11AQ9HCR9 933 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 AGPAT3Q9NRZ7 376 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 RMND1Q9NWS8 449 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 R3HCC1Q9Y3T6 440 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 MTCL1Q9Y4B5 1905 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 REV3LO60673 3130 aa10.83□□□□□ -0.68
SPTLC1-206ENST00000482632 FSD2A1L4K1 749 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 ZNF233A6NK53 670 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 KIAA0391O15091 583 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 EXOC3O60645 756 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 RHOBTB3O94955 611 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 GLP2RO95838 553 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 ADH1AP07327 375 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 KRT19P08727 400 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 CNPP09543 421 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 EPCAMP16422 314 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 TKTP29401 623 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 ARPP19P56211 112 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 DLX2Q07687 328 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 ADAM15Q13444 863 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 RTP2Q5QGT7 225 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 CEP135Q66GS9 1140 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 PTCRAQ6ISU1 281 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 CRELD2Q6UXH1 353 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 NUDT18Q6ZVK8 323 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 PALB2Q86YC2 1186 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 CBWD2Q8IUF1 395 aa10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 SMYD4Q8IYR2 804 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-206ENST00000482632 ENGASEQ8NFI3 743 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms