RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 GFM2Q969S9 779 aaKnown RBP11.27□□□□□ -0.61
SIK3-210ENST00000480468 MPP4Q96JB8 637 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 FAM84BQ96KN1 310 aaPredicted RBP11.27□□□□□ -0.61
SIK3-210ENST00000480468 LRRC4BQ9NT99 713 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 WDR37Q9Y2I8 494 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 PCDHB13Q9Y5F0 798 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 MYO3BQ8WXR4 1341 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 GSTTP1A0A1W2PQM5 241 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 A6NJR5 290 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 EML1O00423 815 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.61
SIK3-210ENST00000480468 BCRP11274 1271 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 IL6STP40189 918 aaPredicted RBP11.27□□□□□ -0.61
SIK3-210ENST00000480468 CLK2P49760 499 aaKnown RBP11.27□□□□□ -0.61
SIK3-210ENST00000480468 MED21Q13503 144 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 DLGAP5Q15398 846 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 MAPK6Q16659 721 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 CCDC142Q17RM4 750 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 B3GNT6Q6ZMB0 384 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 FBXO33Q7Z6M2 555 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 LRRC6Q86X45 466 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 PDSS2Q86YH6 399 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 ZNF276Q8N554 614 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 ZNF564Q8TBZ8 553 aaPredicted RBP11.27□□□□□ -0.61
SIK3-210ENST00000480468 DYNLL2Q96FJ2 89 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 RBM15Q96T37 977 aaKnown RBP eCLIP11.27□□□□□ -0.61
SIK3-210ENST00000480468 SLX1AQ9BQ83 275 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 REEP2Q9BRK0 252 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 ANKRD2Q9GZV1 360 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 CHST7Q9NS84 486 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 FETUBQ9UGM5 382 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 POLIQ9UNA4 740 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 FOXN3O00409 490 aaPredicted RBP11.26□□□□□ -0.61
SIK3-210ENST00000480468 TM9SF1O15321 606 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 TM7SF2O76062 418 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 HARSP12081 509 aaKnown RBP11.26□□□□□ -0.61
SIK3-210ENST00000480468 CPA3P15088 417 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 RRM1P23921 792 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 ZBTB16Q05516 673 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 CFAP157Q5JU67 520 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 IZUMO3Q5VZ72 239 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 USP17L2Q6R6M4 530 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 KYAT3Q6YP21 454 aaKnown RBP11.26□□□□□ -0.61
SIK3-210ENST00000480468 ZNF804AQ7Z570 1209 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 ZNF554Q86TJ5 538 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 PRUNE1Q86TP1 453 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 C4orf33Q8N1A6 199 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 ZBTB8BQ8NAP8 495 aaPredicted RBP11.26□□□□□ -0.61
SIK3-210ENST00000480468 OR6Y1Q8NGX8 325 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 SLC20A1Q8WUM9 679 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 HAUS1Q96CS2 278 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 FAM161BQ96MY7 647 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 ARHGEF4Q9NR80 690 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 OLFML3Q9NRN5 406 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 RHBDL2Q9NX52 303 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 DCTN4Q9UJW0 460 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 GTF3C4Q9UKN8 822 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 ASAP1Q9ULH1 1129 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 SPATA31A6Q5VVP1 1343 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
SIK3-210ENST00000480468 A0A0G2JND7 137 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 TGFB1I1O43294 461 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 OPHN1O60890 802 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 MED24O75448 989 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 IDO1P14902 403 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 UQCRBP14927 111 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 GAP43P17677 238 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 GRIA2P42262 883 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 NOVP48745 357 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 CYLC2Q14093 348 aaPredicted RBP11.25□□□□□ -0.61
SIK3-210ENST00000480468 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.25□□□□□ -0.61
SIK3-210ENST00000480468 DNAL1Q4LDG9 190 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 PARP10Q53GL7 1025 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 MAP3K21Q5TCX8 1036 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 RIPOR1Q6ZS17 1223 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 SCUBE1Q8IWY4 988 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 DIS3LQ8TF46 1054 aaKnown RBP11.25□□□□□ -0.61
SIK3-210ENST00000480468 PWWP2AQ96N64 755 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 IQCGQ9H095 443 aaKnown RBP11.25□□□□□ -0.61
SIK3-210ENST00000480468 RANBP17Q9H2T7 1088 aaKnown RBP11.25□□□□□ -0.61
SIK3-210ENST00000480468 EBF3Q9H4W6 596 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 KCNK13Q9HB14 408 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 PCDH18Q9HCL0 1135 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 TBCCD1Q9NVR7 557 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 PSMC3IPQ9P2W1 217 aaPredicted RBP11.25□□□□□ -0.61
SIK3-210ENST00000480468 CHMP2BQ9UQN3 213 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
SIK3-210ENST00000480468 CSDE1O75534 798 aaKnown RBP11.25□□□□□ -0.61
SIK3-210ENST00000480468 IL2RBP14784 551 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 RFC4P35249 363 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 SLC1A1P43005 524 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 MAGEA10P43363 369 aaPredicted RBP11.25□□□□□ -0.61
SIK3-210ENST00000480468 MYL7Q01449 175 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 SLC15A2Q16348 729 aa11.25□□□□□ -0.61
SIK3-210ENST00000480468 CBWD6Q4V339 395 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms