RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 RLIMQ9NVW2 624 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 ATP11BQ9Y2G3 1177 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 USP15Q9Y4E8 981 aaPredicted RBP6.9□□□□□ -1.3
CCDC58-204ENST00000479414 RNASET2O00584 256 aaKnown RBP6.89□□□□□ -1.31
CCDC58-204ENST00000479414 MATN3O15232 486 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 B3GALT2O43825 422 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 RPS6KA4O75676 772 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 TUSC2O75896 110 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 ANXA1P04083 346 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 CKBP12277 381 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 GNALP38405 381 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 DGCR2P98153 550 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 PLS1Q14651 629 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 CCDC93Q567U6 631 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 CCDC157Q569K6 752 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 TSHZ3Q63HK5 1081 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 CYB5RLQ6IPT4 315 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 ZNF276Q8N554 614 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 TBC1D15Q8TC07 691 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 TEX101Q9BY14 249 aa6.89□□□□□ -1.31
CCDC58-204ENST00000479414 ZNF768Q9H5H4 540 aaKnown RBP6.89□□□□□ -1.31
CCDC58-204ENST00000479414 A0A088AWK7 358 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 MARCH11A6NNE9 402 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 TNFRSF1AP19438 455 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 NR4A1P22736 598 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 ZFP36P26651 326 aaKnown RBP6.88□□□□□ -1.31
CCDC58-204ENST00000479414 HTR1BP28222 390 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 PIK3CGP48736 1102 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 AGFG1P52594 562 aaKnown RBP6.88□□□□□ -1.31
CCDC58-204ENST00000479414 NOMO3P69849 1222 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 FAM189BP81408 668 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 SLFN5Q08AF3 891 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 TUBA3CQ13748 450 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 NOMO2Q5JPE7 1267 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 UTP14CQ5TAP6 766 aaKnown RBP6.88□□□□□ -1.31
CCDC58-204ENST00000479414 TUBA3EQ6PEY2 450 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 LRRC55Q6ZSA7 311 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 NOL8Q76FK4 1167 aaKnown RBP6.88□□□□□ -1.31
CCDC58-204ENST00000479414 PDSS2Q86YH6 399 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 AOPEPQ8N6M6 819 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 SLC25A43Q8WUT9 341 aaPredicted RBP6.88□□□□□ -1.31
CCDC58-204ENST00000479414 MTFMTQ96DP5 389 aaKnown RBP6.88□□□□□ -1.31
CCDC58-204ENST00000479414 SLC35A4Q96G79 324 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 ZNF747Q9BV97 191 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 TMEM60Q9H2L4 133 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 MRPL46Q9H2W6 279 aaKnown RBP6.88□□□□□ -1.31
CCDC58-204ENST00000479414 RNPEPQ9H4A4 650 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 ZDHHC8Q9ULC8 765 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 FPGT-TNNI3KV9GXZ4 949 aa6.88□□□□□ -1.31
CCDC58-204ENST00000479414 A0A1B0GTW7 788 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 PRSS29PA6NIE9 313 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 H3BUI4 141 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 AGFG2O95081 481 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 MATN4O95460 622 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 GNAI3P08754 354 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 USP14P54578 494 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 GNAI1P63096 354 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 GBX1Q14549 363 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 KIF22Q14807 665 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 LLGL1Q15334 1064 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 SWSAP1Q6NVH7 229 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 DGKHQ86XP1 1220 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 CELF5Q8N6W0 485 aaKnown RBP6.87□□□□□ -1.31
CCDC58-204ENST00000479414 LENG9Q96B70 501 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 KLHL32Q96NJ5 620 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 NT5C1BQ96P26 610 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 C1orf43Q9BWL3 253 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 BRD9Q9H8M2 597 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 AKIP1Q9NQ31 210 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 CFAP97Q9P2B7 532 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 SLC45A2Q9UMX9 530 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 FZD1Q9UP38 647 aa6.87□□□□□ -1.31
CCDC58-204ENST00000479414 PPFIA4O75335 1185 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 NCR1O76036 304 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 CFIP05156 583 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 RAB1AP62820 205 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 OCA2Q04671 838 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 PUM1Q14671 1186 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC58-204ENST00000479414 BEAN1Q3B7T3 259 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 LSM12Q3MHD2 195 aaKnown RBP6.86□□□□□ -1.31
CCDC58-204ENST00000479414 ANO6Q4KMQ2 910 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 EMC10Q5UCC4 262 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 CRIP3Q6Q6R5 217 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 DBX2Q6ZNG2 339 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 RHOUQ7L0Q8 258 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 DAAM2Q86T65 1068 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 PPP1R3BQ86XI6 285 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 MAPKAPK5Q8IW41 473 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 SH2D3CQ8N5H7 860 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 SCAMP4Q969E2 229 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 MYEOVQ96EZ4 313 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 MARS2Q96GW9 593 aaKnown RBP6.86□□□□□ -1.31
CCDC58-204ENST00000479414 PNKPQ96T60 521 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 B3GNT5Q9BYG0 378 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 VPS11Q9H270 941 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 GPRC5BQ9NZH0 403 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 DKK2Q9UBU2 259 aa6.86□□□□□ -1.31
CCDC58-204ENST00000479414 FRMPD2Q68DX3 1309 aaPredicted RBP6.85□□□□□ -1.31
CCDC58-204ENST00000479414 CCDC78A2IDD5 438 aa6.85□□□□□ -1.31
CCDC58-204ENST00000479414 FAM227AF5H4B4 570 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms