RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 AGFG2O95081 481 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 FOSP01100 380 aaPredicted RBP8.29□□□□□ -1.08
SMC5-203ENST00000475540 SLC6A4P31645 630 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 EPHB1P54762 984 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 INHBCP55103 352 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 PIN1Q13526 163 aaPredicted RBP8.29□□□□□ -1.08
SMC5-203ENST00000475540 CATIPQ7Z7H3 387 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 BOD1Q96IK1 185 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 ALOXE3Q9BYJ1 711 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 WDR11Q9BZH6 1224 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 GNL3LQ9NVN8 582 aaKnown RBP8.29□□□□□ -1.08
SMC5-203ENST00000475540 USP25Q9UHP3 1055 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 MARCH11A6NNE9 402 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 RAB27AP51159 221 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 TAP1Q03518 808 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 PGS1Q32NB8 556 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 B3GNTL1Q67FW5 361 aaPredicted RBP8.28□□□□□ -1.08
SMC5-203ENST00000475540 MRGPRGQ86SM5 289 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 VRK3Q8IV63 474 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 LCORLQ8N3X6 602 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 RNF31Q96EP0 1072 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 MED15Q96RN5 788 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 ADAM2Q99965 735 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 TTPALQ9BTX7 342 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 KMT5AQ9NQR1 393 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 SIDT1Q9NXL6 827 aaKnown RBP8.28□□□□□ -1.08
SMC5-203ENST00000475540 ZNF180Q9UJW8 692 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 PCDHA3Q9Y5H8 950 aa8.28□□□□□ -1.08
SMC5-203ENST00000475540 AKAP10O43572 662 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 B3GALT2O43825 422 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 RAMP2O60895 175 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 CYP2C19P33261 490 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 ZEB1P37275 1124 aaPredicted RBP8.27□□□□□ -1.09
SMC5-203ENST00000475540 CXADRP78310 365 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 TP53BP2Q13625 1128 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 KRTAP5-3Q6L8H2 238 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 SLC4A10Q6U841 1118 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 RGMAQ96B86 450 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 GTPBP4Q9BZE4 634 aaKnown RBP8.27□□□□□ -1.09
SMC5-203ENST00000475540 GALNT9Q9HCQ5 603 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 TMEM74BQ9NUR3 256 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 KCNE5Q9UJ90 142 aa8.27□□□□□ -1.09
SMC5-203ENST00000475540 PNMA8BQ9ULN7 279 aaPredicted RBP8.27□□□□□ -1.09
SMC5-203ENST00000475540 WDR33Q9C0J8 1336 aaKnown RBP8.27□□□□□ -1.09
SMC5-203ENST00000475540 LRRC14BA6NHZ5 514 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 F2RL2O00254 374 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 FOXN1O15353 648 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 SPDEFO95238 335 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 FTLP02792 175 aaPredicted RBP8.26□□□□□ -1.09
SMC5-203ENST00000475540 FTH1P19P0C7X4 201 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 USP14P54578 494 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 SLFN5Q08AF3 891 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 FLYWCH1Q4VC44 716 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 CCDC157Q569K6 752 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 ZNF365Q70YC5 407 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 LDLRAD3Q86YD5 345 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 JPH3Q8WXH2 748 aaPredicted RBP8.26□□□□□ -1.09
SMC5-203ENST00000475540 MVB12AQ96EY5 273 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 MAP3K14Q99558 947 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 COL4A3Q01955 1670 aa8.26□□□□□ -1.09
SMC5-203ENST00000475540 PIPSLA2A3N6 862 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 CCDC78A2IDD5 438 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 OFD1O75665 1012 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 ANXA1P04083 346 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 GNAI3P08754 354 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 FCER1AP12319 257 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 FXR1P51114 621 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMC5-203ENST00000475540 HK3P52790 923 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 GNAI1P63096 354 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 NOGQ13253 232 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 ODR4Q5SWX8 454 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 ABHD17BQ5VST6 288 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 Q6ZPA2 131 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 ANKRD13AQ8IZ07 590 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 CHFRQ96EP1 664 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 RHOBTB2Q9BYZ6 727 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 BRD9Q9H8M2 597 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 HSFX1Q9UBD0 423 aa8.25□□□□□ -1.09
SMC5-203ENST00000475540 A0A087X1B8 175 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 NT5C1B-RDH14C9J2C7 533 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 KRT4P19013 534 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 ZNF844Q08AG5 666 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 FSTL1Q12841 308 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 PLEKHG6Q3KR16 790 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 CCDC93Q567U6 631 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 IFIT1BQ5T764 474 aaKnown RBP8.24□□□□□ -1.09
SMC5-203ENST00000475540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.24□□□□□ -1.09
SMC5-203ENST00000475540 HEATR3Q7Z4Q2 680 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 COLGALT2Q8IYK4 626 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 SLC17A8Q8NDX2 589 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 SUPT20HQ8NEM7 779 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 HPS3Q969F9 1004 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 CAMKK2Q96RR4 588 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 WDCPQ9H6R7 721 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 ABCF2Q9UG63 623 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 TESQ9UGI8 421 aaKnown RBP8.24□□□□□ -1.09
SMC5-203ENST00000475540 SLC45A2Q9UMX9 530 aa8.24□□□□□ -1.09
SMC5-203ENST00000475540 MYADML2A6NDP7 307 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 GCP02774 474 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms