RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 AMPD3Q01432 767 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 GEN1Q17RS7 908 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 DACT2Q5SW24 774 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 GADL1Q6ZQY3 521 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 ZNF575Q86XF7 245 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 COLGALT2Q8IYK4 626 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 CLPTM1LQ96KA5 538 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 TLR10Q9BXR5 811 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 UNKLQ9H9P5 680 aaKnown RBP6.12□□□□□ -1.43
LTN1-204ENST00000475344 RSAD1Q9HA92 442 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 SALL3Q9BXA9 1300 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 GABRDO14764 452 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 ZFPL1O95159 310 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 CD1AP06126 327 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 MTHFD1P11586 935 aaKnown RBP6.11□□□□□ -1.43
LTN1-204ENST00000475344 CCND1P24385 295 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 SLC6A4P31645 630 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 MPLP40238 635 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 WASP42768 502 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 PTH2RP49190 550 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 SLFN5Q08AF3 891 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 PABPC1LQ4VXU2 614 aaKnown RBP6.11□□□□□ -1.43
LTN1-204ENST00000475344 UTP14CQ5TAP6 766 aaKnown RBP6.11□□□□□ -1.43
LTN1-204ENST00000475344 EFCAB2Q5VUJ9 269 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 IFI44Q8TCB0 444 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 PACSIN1Q9BY11 444 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 KIAA1586Q9HCI6 787 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 TMEM74BQ9NUR3 256 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 PTGFRNQ9P2B2 879 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 LRIT1Q9P2V4 623 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 KAT6AQ92794 2004 aa6.11□□□□□ -1.43
LTN1-204ENST00000475344 CADPSQ9ULU8 1353 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 MAST3O60307 1309 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 TYRP1P17643 537 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 CLK3P49761 638 aaKnown RBP6.1□□□□□ -1.43
LTN1-204ENST00000475344 VAV2P52735 878 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 PPP4R3AQ6IN85 833 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 Q6ZNX1 250 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 ADGRG3Q86Y34 549 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 TMEM125Q96AQ2 219 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 AIFM2Q9BRQ8 373 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 IPPQ9Y573 584 aa6.1□□□□□ -1.43
LTN1-204ENST00000475344 SPATA31A6Q5VVP1 1343 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 EDNRBP24530 442 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 PREPLQ4J6C6 727 aaPredicted RBP6.09□□□□□ -1.43
LTN1-204ENST00000475344 RD3Q7Z3Z2 195 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 CAGE1Q8TC20 777 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 SSH3Q8TE77 659 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 COA7Q96BR5 231 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 IMPG2Q9BZV3 1241 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.09□□□□□ -1.43
LTN1-204ENST00000475344 SERPINB13Q9UIV8 391 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 DMTF1Q9Y222 760 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 INSL6Q9Y581 213 aa6.09□□□□□ -1.43
LTN1-204ENST00000475344 ALG1L2C9J202 215 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 FZD9O00144 591 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 SGTAO43765 313 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 MRPS35P82673 323 aaKnown RBP6.08□□□□□ -1.44
LTN1-204ENST00000475344 ODF1Q14990 250 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 SF3B3Q15393 1217 aaKnown RBP6.08□□□□□ -1.44
LTN1-204ENST00000475344 PRR16Q569H4 304 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 SIMC1Q8NDZ2 872 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 NSUN7Q8NE18 718 aaKnown RBP6.08□□□□□ -1.44
LTN1-204ENST00000475344 MED15Q96RN5 788 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 VRK1Q99986 396 aaPredicted RBP6.08□□□□□ -1.44
LTN1-204ENST00000475344 TLK1Q9UKI8 766 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 SLC45A2Q9UMX9 530 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 PCDHB1Q9Y5F3 818 aa6.08□□□□□ -1.44
LTN1-204ENST00000475344 TNKSO95271 1327 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 WASHC2CQ9Y4E1 1318 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 MYADML2A6NDP7 307 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 RPLP2P05387 115 aaKnown RBP6.07□□□□□ -1.44
LTN1-204ENST00000475344 FPGSQ05932 587 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 ZNF844Q08AG5 666 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 RAB39AQ14964 217 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 FLYWCH1Q4VC44 716 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 FBXO42Q6P3S6 717 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 AOPEPQ8N6M6 819 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 SLC17A8Q8NDX2 589 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 ACTRT2Q8TDY3 377 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 SLC9A6Q92581 669 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 MRGPRX4Q96LA9 322 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 KLHL32Q96NJ5 620 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 DUSP26Q9BV47 211 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 COL4A3BPQ9Y5P4 624 aa6.07□□□□□ -1.44
LTN1-204ENST00000475344 COL11A2P13942 1736 aaPredicted RBP6.06□□□□□ -1.44
LTN1-204ENST00000475344 TOR1BO14657 336 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 PEX1O43933 1283 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 KCNA2P16389 499 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 TLE1Q04724 770 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 ZNF169Q14929 603 aaPredicted RBP6.06□□□□□ -1.44
LTN1-204ENST00000475344 CD300EQ496F6 205 aaPredicted RBP6.06□□□□□ -1.44
LTN1-204ENST00000475344 KHDC1Q4VXA5 237 aaKnown RBP6.06□□□□□ -1.44
LTN1-204ENST00000475344 ZNF365Q70YC5 407 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 CLNKQ7Z7G1 428 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 ARHGEF25Q86VW2 580 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 MIER2Q8N344 545 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 TMIEQ8NEW7 156 aa6.06□□□□□ -1.44
LTN1-204ENST00000475344 IL17RDQ8NFM7 739 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms