RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ZCWPW1Q9H0M4 648 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 TLE6Q9H808 572 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 UBQLN1Q9UMX0 589 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 CARNS1A5YM72 827 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 KIAA0391O15091 583 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 TDP2O95551 362 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 GUCY1A2P33402 732 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 GRK3P35626 688 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 BEX3Q00994 111 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 PDE1CQ14123 709 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 CCNYL1Q8N7R7 359 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 C1orf131Q8NDD1 294 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 ARL8AQ96BM9 186 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 SPATC1LQ9H0A9 340 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 NEUROD4Q9HD90 331 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 NFKBIL1Q9UBC1 381 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 FRMD3A2A2Y4 597 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 C3orf70A6NLC5 250 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 RAB27AP51159 221 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 THOP1P52888 689 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 DAB2P98082 770 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 ACVR2BQ13705 512 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 FASTKD1Q53R41 847 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 PLPP4Q5VZY2 271 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 PPP1R14AQ96A00 147 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 PNKPQ96T60 521 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 CD274Q9NZQ7 290 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 UXTQ9UBK9 157 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 RWDD2AQ9UIY3 292 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 MRPS23Q9Y3D9 190 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 DTNAQ9Y4J8 743 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 ENC1O14682 589 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 TBC1D12O60347 775 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 AP1G2O75843 785 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 ZNF853P0CG23 659 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 VCAM1P19320 739 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 C12orf60Q5U649 245 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 WHAMMQ8TF30 809 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 SUSD6Q92537 303 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 USP13Q92995 863 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 RNF25Q96BH1 459 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 MXRA8Q9BRK3 442 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 Q9H521 79 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 SPG21Q9NZD8 308 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 SCHIP1Q9P0W5 487 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 PPIEQ9UNP9 301 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 STRNO43815 780 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 FTCDO95954 541 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 GNRH1P01148 92 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 FGBP02675 491 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 GFAPP14136 432 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 TCP1P17987 556 aaKnown RBP9.02□□□□□ -0.96
CD47-204ENST00000471694 LIFRP42702 1097 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 PLTPP55058 493 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 EFEMP1Q12805 493 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 SGSM1Q2NKQ1 1148 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 C8orf34Q49A92 452 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 ARL6IP4Q66PJ3 421 aaKnown RBP9.02□□□□□ -0.96
CD47-204ENST00000471694 CCDC149Q6ZUS6 474 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 GET4Q7L5D6 327 aaPredicted RBP9.02□□□□□ -0.96
CD47-204ENST00000471694 MTBPQ96DY7 904 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 NUP85Q9BW27 656 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 PARVAQ9NVD7 372 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 DNAJC17Q9NVM6 304 aaKnown RBP9.02□□□□□ -0.96
CD47-204ENST00000471694 MAN1B1Q9UKM7 699 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 PITPNM2Q9BZ72 1349 aa9.02□□□□□ -0.96
CD47-204ENST00000471694 HEATR9A2RTY3 570 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 IFRD1O00458 451 aaPredicted RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 ZNF189O75820 626 aaPredicted RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 SLC2A3P11169 496 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 PSEN2P49810 448 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 CYB5R4Q7L1T6 521 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 RFWD2Q8NHY2 731 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 MAP4K1Q92918 833 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 PAGE5Q96GU1 130 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ATXN7L3BQ96GX2 97 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 HPDLQ96IR7 371 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 CDK5RAP1Q96SZ6 601 aaKnown RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 ARHGAP9Q9BRR9 750 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 NPHP3-ACAD11A0A0J9YXS1 232 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 EXOC1LA0A1B0GW35 172 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 SLC12A8A0AV02 714 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 KPNA7A9QM74 516 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 MAFGO15525 162 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 AMD1P17707 334 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 CENPCQ03188 943 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 TAP1Q03518 808 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ZNF543Q08ER8 600 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 NCOA4Q13772 614 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 PDCD2Q16342 344 aaPredicted RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 JAMLQ86YT9 394 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 C12orf50Q8NA57 414 aaPredicted RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 UBA3Q8TBC4 463 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ARNTL2Q8WYA1 636 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 PDGFDQ9GZP0 370 aaPredicted RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 LSG1Q9H089 658 aaKnown RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 TLR8Q9NR97 1041 aaKnown RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 BFARQ9NZS9 450 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 PCDHGA4Q9Y5G9 962 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ADGRB3O60242 1522 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms