RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 VNN1O95497 513 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 CST3P01034 146 aaPredicted RBP10.48□□□□□ -0.73
CCM2-204ENST00000470837 AMHP03971 560 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 SERPING1P05155 500 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 KRT5P13647 590 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 RPL9P32969 192 aaKnown RBP10.48□□□□□ -0.73
CCM2-204ENST00000470837 SOX5P35711 763 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 SCNN1GP51170 649 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 BPIFB4P59827 614 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 APBA1Q02410 837 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 GRIK3Q13003 919 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 PPIGQ13427 754 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCM2-204ENST00000470837 CUL2Q13617 745 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 ARID5BQ14865 1188 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 WDR72Q3MJ13 1102 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 SV2CQ496J9 727 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 XKR4Q5GH76 650 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 MFSD5Q6N075 450 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 PHLDB3Q6NSJ2 640 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 GJB7Q6PEY0 223 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 AGMOQ6ZNB7 445 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 NPAS4Q8IUM7 802 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 ARHGEF19Q8IW93 802 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 LRRC52Q8N7C0 313 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 BAP1Q92560 729 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 C18orf25Q96B23 403 aaPredicted RBP10.48□□□□□ -0.73
CCM2-204ENST00000470837 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
CCM2-204ENST00000470837 ZFP42Q96MM3 310 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 UROC1Q96N76 676 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 ZMAT2Q96NC0 199 aaKnown RBP10.48□□□□□ -0.73
CCM2-204ENST00000470837 MMS19Q96T76 1030 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 MRPL9Q9BYD2 267 aaKnown RBP10.48□□□□□ -0.73
CCM2-204ENST00000470837 OSBPL7Q9BZF2 842 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 LUC7LQ9NQ29 371 aaKnown RBP10.48□□□□□ -0.73
CCM2-204ENST00000470837 AIPL1Q9NZN9 384 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 TUBGCP4Q9UGJ1 667 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 TRIP12Q14669 1992 aaPredicted RBP10.48□□□□□ -0.73
CCM2-204ENST00000470837 ARHGEF37A1IGU5 675 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 TRIM43BA6NCK2 446 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 AKR1B10O60218 316 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 EVI5O60447 810 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 GFPT2O94808 682 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 STAU1O95793 577 aaKnown RBP10.47□□□□□ -0.73
CCM2-204ENST00000470837 POMCP01189 267 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 PAX3P23760 479 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 HNRNPH3P31942 346 aaKnown RBP10.47□□□□□ -0.73
CCM2-204ENST00000470837 KCNJ6P48051 423 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 TAF6P49848 677 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 PDE6CP51160 858 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 FAM189BP81408 668 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 CDK17Q00537 523 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 SPA17Q15506 151 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 ZBTB6Q15916 424 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 NOMO2Q5JPE7 1267 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 SMYD5Q6GMV2 418 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 SPOPLQ6IQ16 392 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 CCDC170Q8IYT3 715 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 C7orf61Q8IZ16 206 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 TXLNBQ8N3L3 684 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 HELQQ8TDG4 1101 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 TATDN2Q93075 761 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 TRIM43Q96BQ3 446 aaPredicted RBP10.47□□□□□ -0.73
CCM2-204ENST00000470837 FAM84AQ96KN4 292 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 PPP1R10Q96QC0 940 aaKnown RBP10.47□□□□□ -0.73
CCM2-204ENST00000470837 LBHD1Q9BQE6 289 aaPredicted RBP10.47□□□□□ -0.73
CCM2-204ENST00000470837 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCM2-204ENST00000470837 CYP3A43Q9HB55 503 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 SIX4Q9UIU6 781 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 NUB1Q9Y5A7 615 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 PCDHB4Q9Y5E5 795 aa10.47□□□□□ -0.73
CCM2-204ENST00000470837 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCM2-204ENST00000470837 RNF225M0QZC1 329 aaPredicted RBP10.46□□□□□ -0.73
CCM2-204ENST00000470837 PTGESO14684 152 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 MEFVO15553 781 aaPredicted RBP10.46□□□□□ -0.73
CCM2-204ENST00000470837 BAIAP3O94812 1187 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 CSF2RAP15509 400 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 ANXA13P27216 316 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 LRPAP1P30533 357 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 GUCY2FP51841 1108 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 JAM2P57087 298 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 KRT83P78385 493 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 PTK2Q05397 1052 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 FPGSQ05932 587 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 TUSC3Q13454 348 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 GPNMBQ14956 572 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 MEA1Q16626 185 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 C9orf57Q5W0N0 161 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 SCARA5Q6ZMJ2 495 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 UBE2Q1Q7Z7E8 422 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 ZNF598Q86UK7 904 aaKnown RBP10.46□□□□□ -0.73
CCM2-204ENST00000470837 RTN4RL1Q86UN2 441 aaPredicted RBP10.46□□□□□ -0.73
CCM2-204ENST00000470837 SHC3Q92529 594 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 DPF3Q92784 378 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 PDCL3Q9H2J4 239 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 FAM124BQ9H5Z6 455 aaPredicted RBP10.46□□□□□ -0.73
CCM2-204ENST00000470837 VRTNQ9H8Y1 702 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 NHEJ1Q9H9Q4 299 aaPredicted RBP10.46□□□□□ -0.73
CCM2-204ENST00000470837 APOBEC3GQ9HC16 384 aaKnown RBP10.46□□□□□ -0.73
CCM2-204ENST00000470837 RNF19AQ9NV58 838 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 SEPT11Q9NVA2 429 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms