RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 A0A1W2PQ67 120 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 MACROD2A1Z1Q3 448 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 TRIM75PA6NK02 468 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 TSPY2A6NKD2 308 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 A6NNZ2 444 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 BTBD19C9JJ37 291 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 MATN2O00339 956 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 GREM1O60565 184 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PDE8AO60658 829 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 FLOT1O75955 427 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 OPN1MWP04001 364 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 HMGN1P05114 100 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 GSTA2P09210 222 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 CLTAP09496 248 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 TSPY3P0CV98 308 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 TSPY8P0CW00 308 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 OPN1MW2P0DN77 364 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 OPN1MW3P0DN78 364 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PRKAR1AP10644 381 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 TRIM27P14373 513 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 VCLP18206 1134 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 TFEBP19484 476 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 CASTP20810 708 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 XPAP23025 273 aaPredicted RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 EEF1GP26641 437 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 CRABP2P29373 138 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 IDUAP35475 653 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 SCNN1GP51170 649 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 VCPP55072 806 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PPP2R2AP63151 447 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 BEX3Q00994 111 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 TSPY1Q01534 308 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 IL1RL1Q01638 556 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 RNASELQ05823 741 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 GFPT1Q06210 699 aaPredicted RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 ACTN3Q08043 901 aaPredicted RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 RIPK1Q13546 671 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PPP2R5DQ14738 602 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PPA1Q15181 289 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 MAP3K11Q16584 847 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 TUBB8Q3ZCM7 444 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 KRTCAP3Q53RY4 240 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 FBXO48Q5FWF7 155 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PPP6R3Q5H9R7 873 aaPredicted RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 AKAP4Q5JQC9 854 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 C20orf194Q5TEA3 1177 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 VWA5B1Q5TIE3 1220 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 KIAA0319Q5VV43 1072 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 DENND2CQ68D51 928 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 ATL3Q6DD88 541 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PM20D1Q6GTS8 502 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 FAM122CQ6P4D5 195 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 IGF2-ASQ6U949 168 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 OLFM4Q6UX06 510 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 TOGARAM2Q6ZUX3 1019 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 ANO5Q75V66 913 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 DHX32Q7L7V1 743 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 KRT26Q7Z3Y9 468 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 DPP9Q86TI2 863 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 AKAP14Q86UN6 197 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PALB2Q86YC2 1186 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 GATAD2AQ86YP4 633 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 GALNT13Q8IUC8 556 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 WDR49Q8IV35 697 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 CDH26Q8IXH8 852 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 NRSN1Q8IZ57 195 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 KIRREL3Q8IZU9 778 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 LRRC71Q8N4P6 559 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 FAM26EQ8N5C1 309 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 ZBTB38Q8NAP3 1195 aaPredicted RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 OR10Z1Q8NGY1 313 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 OR8K3Q8NH51 312 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 FAM71BQ8TC56 605 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 HCAR2Q8TDS4 363 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 UTP15Q8TED0 518 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 NSMCE1Q8WV22 266 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 BSNDQ8WZ55 320 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 STARD8Q92502 1023 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 SLC9A6Q92581 669 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 GFM2Q969S9 779 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 ZC3H10Q96K80 434 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 FBXL18Q96ME1 805 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 CNTNAP3BQ96NU0 1288 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 DHRS9Q9BPW9 319 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 SLF1Q9BQI6 1058 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 CCDC28BQ9BUN5 200 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 KIFC3Q9BVG8 833 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 FAM126AQ9BYI3 521 aaPredicted RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 CNTNAP3Q9BZ76 1288 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 KRT23Q9C075 422 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PITHD1Q9GZP4 211 aaPredicted RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 NYXQ9GZU5 481 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 KCNF1Q9H3M0 494 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 NTN4Q9HB63 628 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 MRM3Q9HC36 420 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 C12orf4Q9NQ89 552 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PFDN4Q9NQP4 134 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 GLRX2Q9NS18 164 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 ZBTB40Q9NUA8 1239 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 FANCLQ9NW38 375 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms