RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 HHIPL1Q96JK4 782 aa9.62□□□□□ -0.87
TMEM254-209ENST00000467529 GCOM2Q9BZD3 368 aaPredicted RBP9.62□□□□□ -0.87
TMEM254-209ENST00000467529 NIF3L1Q9GZT8 377 aa9.62□□□□□ -0.87
TMEM254-209ENST00000467529 XYLT2Q9H1B5 865 aa9.62□□□□□ -0.87
TMEM254-209ENST00000467529 CHORDC1Q9UHD1 332 aaPredicted RBP9.62□□□□□ -0.87
TMEM254-209ENST00000467529 SIX4Q9UIU6 781 aa9.62□□□□□ -0.87
TMEM254-209ENST00000467529 GINS2Q9Y248 185 aa9.62□□□□□ -0.87
TMEM254-209ENST00000467529 CCDC151A5D8V7 595 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 MTA2O94776 668 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ZRANB2O95218 330 aaKnown RBP eCLIP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CYP1A1P04798 512 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CFHP08603 1231 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 AKR1A1P14550 325 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 GNA15P30679 374 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ZNF132P52740 706 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 FCGRTP55899 365 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 RNASE9P60153 205 aaKnown RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 VSNL1P62760 191 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 FAM193AP78312 1265 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ZNF200P98182 395 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CDC42EP1Q00587 391 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 GABPB1Q06547 395 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 FSCN1Q16658 493 aaKnown RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ZNF699Q32M78 642 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CYP4F22Q6NT55 531 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 PAXIP1Q6ZW49 1069 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 KRT222Q8N1A0 295 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 TMEM130Q8N3G9 435 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 C1orf127Q8N9H9 656 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 DNAJB3Q8WWF6 145 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CPA5Q8WXQ8 436 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CALR3Q96L12 384 aaKnown RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ADPGKQ9BRR6 497 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 NUP85Q9BW27 656 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 GPBP1L1Q9HC44 474 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 RBM12Q9NTZ6 932 aaKnown RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 FAM53CQ9NYF3 392 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 GTF3C4Q9UKN8 822 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 GABRQQ9UN88 632 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ALG6Q9Y672 507 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 TARSL2A2RTX5 802 aaKnown RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 MYADML2A6NDP7 307 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 KIF3CO14782 793 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 DDX3YO15523 660 aaKnown RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 TREHO43280 583 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ATP8B1O43520 1251 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CEP104O60308 925 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 DUSP11O75319 330 aaKnown RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 TUBBP07437 444 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 KRT19P08727 400 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CD58P19256 250 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 HOXA11P31270 313 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 SSTR3P32745 418 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 PURAQ00577 322 aaKnown RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 NAA35Q5VZE5 725 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 C11orf63Q6NUN7 778 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 WDR93Q6P2C0 686 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 SCARA5Q6ZMJ2 495 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CATSPER4Q7RTX7 472 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 MCOLN2Q8IZK6 566 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 SMC1BQ8NDV3 1235 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ZNF564Q8TBZ8 553 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CYFIP2Q96F07 1278 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ACAP3Q96P50 834 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 OSMRQ99650 979 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 LRRC1Q9BTT6 524 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 SELENOOQ9BVL4 669 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 KATNAL1Q9BW62 490 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ASB7Q9H672 318 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 ARFGAP3Q9NP61 516 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CISHQ9NSE2 258 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 CNOT8Q9UFF9 292 aaKnown RBP9.61□□□□□ -0.87
TMEM254-209ENST00000467529 POLIQ9UNA4 740 aa9.61□□□□□ -0.87
TMEM254-209ENST00000467529 MROH7Q68CQ1 1323 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 TMEM110-MUSTN1A8MSY1 372 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 THAP12O43422 761 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 NPTXRO95502 500 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 ITGB3P05106 788 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 WEE2P0C1S8 567 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 CYBAP13498 195 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 DARSP14868 501 aaKnown RBP9.6□□□□□ -0.87
TMEM254-209ENST00000467529 GRM5P41594 1212 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 ASPAP45381 313 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 LACTBP83111 547 aaPredicted RBP9.6□□□□□ -0.87
TMEM254-209ENST00000467529 CENPCQ03188 943 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 DMTNQ08495 405 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 MESDQ14696 234 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 DCAF4L1Q3SXM0 396 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 TRIM72Q6ZMU5 477 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 USP38Q8NB14 1042 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 CXorf38Q8TB03 319 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 ACTRT1Q8TDG2 376 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 HNRNPLLQ8WVV9 542 aaKnown RBP9.6□□□□□ -0.87
TMEM254-209ENST00000467529 TRIB2Q92519 343 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 BTBD6Q96KE9 485 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 UVRAGQ9P2Y5 699 aa9.6□□□□□ -0.87
TMEM254-209ENST00000467529 NXF1Q9UBU9 619 aaKnown RBP9.6□□□□□ -0.87
TMEM254-209ENST00000467529 TRIP12Q14669 1992 aaPredicted RBP9.6□□□□□ -0.87
TMEM254-209ENST00000467529 C17orf102A2RUQ5 167 aa9.59□□□□□ -0.87
TMEM254-209ENST00000467529 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms