RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 PRSS29PA6NIE9 313 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 ZNF785A8K8V0 405 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 CXorf49A8MYA2 514 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-209ENST00000467124 BTN3A1O00481 513 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 SH3BP5O60239 455 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 B4GALT4O60513 344 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 PPFIA4O75335 1185 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 GJB1P08034 283 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 EN2P19622 333 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-209ENST00000467124 TECP42680 631 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 HSPA7P48741 367 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 NPEPPSP55786 919 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 HGFACQ04756 655 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 SP140Q13342 867 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 RAPGEF1Q13905 1077 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 HSP90AB4PQ58FF6 505 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 CMTM4Q8IZR5 234 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 RNF152Q8N8N0 203 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 RNF169Q8NCN4 708 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 OR6B3Q8NGW1 331 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 PPM1EQ8WY54 764 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 CCT6BQ92526 530 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 TMEM176AQ96HP8 235 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 PHACTR3Q96KR7 559 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 DPYSL5Q9BPU6 564 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 HERPUD2Q9BSE4 406 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 STK31Q9BXU1 1019 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 IL23AQ9NPF7 189 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-209ENST00000467124 MRPS18AQ9NVS2 196 aaKnown RBP4.98□□□□□ -1.61
VPS13A-209ENST00000467124 FBXO34Q9NWN3 711 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 MOCS1Q9NZB8 636 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 AFF4Q9UHB7 1163 aaKnown RBP4.98□□□□□ -1.61
VPS13A-209ENST00000467124 ITGB1BP2Q9UKP3 347 aa4.98□□□□□ -1.61
VPS13A-209ENST00000467124 hCG_1642624A0A1W2PR95 340 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 ISM1B1AKI9 464 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 NPIPB6E9PJ23 425 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 NUAK1O60285 661 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 TBC1D4O60343 1298 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 UNC5CO95185 931 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 GNAI3P08754 354 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 FTH1P19P0C7X4 201 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 SLC6A2P23975 617 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 GZMKP49863 264 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 GNAI1P63096 354 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 BTKQ06187 659 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 SLC13A2Q13183 592 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 CTBP1Q13363 440 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 SURF1Q15526 300 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 ATP2B3Q16720 1220 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 MPEG1Q2M385 716 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 SLC35G1Q2M3R5 365 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 ARL13BQ3SXY8 428 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 PABPC1LQ4VXU2 614 aaKnown RBP4.97□□□□□ -1.61
VPS13A-209ENST00000467124 CCDC38Q502W7 563 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 FAM47AQ5JRC9 791 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 ZNF783Q6ZMS7 281 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 ADGRE4PQ86SQ3 457 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 KBTBD2Q8IY47 623 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 SYTL1Q8IYJ3 562 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 CPXCR1Q8N123 301 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 RABGGTAQ92696 567 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 ARL8AQ96BM9 186 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 LRRC46Q96FV0 321 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 UNKQ9C0B0 810 aaKnown RBP4.97□□□□□ -1.61
VPS13A-209ENST00000467124 GSTO2Q9H4Y5 243 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 BRD9Q9H8M2 597 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 AGO3Q9H9G7 860 aaKnown RBP4.97□□□□□ -1.61
VPS13A-209ENST00000467124 SMURF2Q9HAU4 748 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 AGAP1Q9UPQ3 857 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 PNPLA7Q6ZV29 1317 aa4.97□□□□□ -1.61
VPS13A-209ENST00000467124 A0A1W2PRX2 142 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 CDHR4A6H8M9 788 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 M0QYG6 137 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 SLC26A4O43511 780 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 WDHD1O75717 1129 aaPredicted RBP4.96□□□□□ -1.62
VPS13A-209ENST00000467124 ABHD16AO95870 558 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 ZNF135P52742 658 aaPredicted RBP4.96□□□□□ -1.62
VPS13A-209ENST00000467124 HTRA4P83105 476 aaPredicted RBP4.96□□□□□ -1.62
VPS13A-209ENST00000467124 GRM1Q13255 1194 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 RIN1Q13671 783 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 PUM3Q15397 648 aaKnown RBP4.96□□□□□ -1.62
VPS13A-209ENST00000467124 CRB2Q5IJ48 1285 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 DGKKQ5KSL6 1271 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 UTP14CQ5TAP6 766 aaKnown RBP4.96□□□□□ -1.62
VPS13A-209ENST00000467124 UNC13DQ70J99 1090 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 ZNF354CQ86Y25 554 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 SLC15A4Q8N697 577 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 ATP11CQ8NB49 1132 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 TP53I13Q8NBR0 393 aaPredicted RBP4.96□□□□□ -1.62
VPS13A-209ENST00000467124 OR56A3Q8NH54 315 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 ZSCAN18Q8TBC5 510 aaPredicted RBP4.96□□□□□ -1.62
VPS13A-209ENST00000467124 CFHR4Q92496 578 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 MUL1Q969V5 352 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 ZNF566Q969W8 418 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 TOX2Q96NM4 488 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 LRRC37BQ96QE4 947 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 NDC1Q9BTX1 674 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 SEC61A2Q9H9S3 476 aa4.96□□□□□ -1.62
VPS13A-209ENST00000467124 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms