RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 RUBCNQ92622 972 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 SCLT1Q96NL6 688 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.54■□□□□ 0.721e-16■□□□□ 9.6
COL9A3-205ENST00000466192 AP1M1Q9BXS5 423 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 TMEM59LQ9UK28 342 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 RRN3P2A6NIE6 340 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 H3BQF6 201 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 TSPAN1O60635 241 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 IGHA2P01877 340 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 GLI1P08151 1106 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 STAG3L1P0CL83 205 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 SMIM10L2AP0DMW4 78 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 SMIM10L2BP0DMW5 78 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 UNGP13051 313 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-205ENST00000466192 CTGFP29279 349 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 UBR7Q8N806 425 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 TLL2Q9Y6L7 1015 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 MTA2O94776 668 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 HEXIM1O94992 359 aaKnown RBP19.53■□□□□ 0.72
COL9A3-205ENST00000466192 CYP1A2P05177 515 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 GPS2Q13227 327 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 SGSM1Q2NKQ1 1148 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 RBBP8NLQ8NC74 664 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-205ENST00000466192 ZNF653Q96CK0 615 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 ZIC5Q96T25 663 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 APBA2Q99767 749 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 GTF3C4Q9UKN8 822 aa19.53■□□□□ 0.72
COL9A3-205ENST00000466192 ZSCAN5CA6NGD5 496 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-205ENST00000466192 LACTBL1A8MY62 500 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 TNPO2O14787 897 aaKnown RBP19.52■□□□□ 0.72
COL9A3-205ENST00000466192 IL18RAPO95256 599 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 TNNC2P02585 160 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 CFHP08603 1231 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 TNNC1P63316 161 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 TMEM62Q0P6H9 643 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 TRPC3Q13507 836 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 KIZQ2M2Z5 673 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 ZNF410Q86VK4 478 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 AENQ8WTP8 325 aaKnown RBP19.52■□□□□ 0.72
COL9A3-205ENST00000466192 ANKRD36BP1Q96IX9 119 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 FAM49AQ9H0Q0 323 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-205ENST00000466192 XYLT2Q9H1B5 865 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 ALG6Q9Y672 507 aa19.52■□□□□ 0.72
COL9A3-205ENST00000466192 NRCAMQ92823 1304 aa19.52■□□□□ 0.71
COL9A3-205ENST00000466192 DNAH12Q6ZR08 3092 aa19.52■□□□□ 0.71
COL9A3-205ENST00000466192 TMEM110-MUSTN1A8MSY1 372 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 DDX3YO15523 660 aaKnown RBP19.51■□□□□ 0.71
COL9A3-205ENST00000466192 NFICP08651 508 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 FGFR4P22455 802 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 GNA15P30679 374 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 HIC1Q14526 733 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 C11orf63Q6NUN7 778 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 TMEM130Q8N3G9 435 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 SOCS4Q8WXH5 440 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 CALR3Q96L12 384 aaKnown RBP19.51■□□□□ 0.71
COL9A3-205ENST00000466192 ADAMTS10Q9H324 1103 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 ESYT3A0FGR9 886 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 ERLIN2O94905 339 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 CYP1A1P04798 512 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-205ENST00000466192 ZNF132P52740 706 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 GUCY2DQ02846 1103 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 MFSD10Q14728 455 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 DCAF12L1Q5VU92 463 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 RASGEF1CQ8N431 466 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 CPA5Q8WXQ8 436 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 NUP85Q9BW27 656 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 NIF3L1Q9GZT8 377 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 EPB41L5Q9HCM4 733 aa19.51■□□□□ 0.71
COL9A3-205ENST00000466192 A0A1B0GUA9 196 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 KRIT1O00522 736 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 RAD51CO43502 376 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 BEX3Q00994 111 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 SREBF2Q12772 1141 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 MESDQ14696 234 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 ZNF699Q32M78 642 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 ZNF564Q8TBZ8 553 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-205ENST00000466192 CYFIP2Q96F07 1278 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 SIX4Q9UIU6 781 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 MBLAC1A4D2B0 266 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-205ENST00000466192 SSTR3P32745 418 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-205ENST00000466192 TERF2Q15554 542 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 SLC10A6Q3KNW5 377 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 NAA35Q5VZE5 725 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 JADE1Q6IE81 842 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 IFT20Q8IY31 132 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 CCDC102AQ96A19 550 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 VIPAS39Q9H9C1 493 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 CDHR5Q9HBB8 845 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 CNOT8Q9UFF9 292 aaKnown RBP19.5■□□□□ 0.71
COL9A3-205ENST00000466192 HPCAL4Q9UM19 191 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 GINS2Q9Y248 185 aa19.5■□□□□ 0.71
COL9A3-205ENST00000466192 HAS3O00219 553 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 GPR32O75388 356 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 FGGP02679 453 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 ITGA4P13612 1032 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 CD58P19256 250 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 ASPAP45381 313 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 PSEN2P49810 448 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 CPT1AP50416 773 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 CENPCQ03188 943 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms