RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 PIRO00625 290 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 DLATP10515 647 aaKnown RBP13.39□□□□□ -0.27
CHPF2-202ENST00000465601 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
CHPF2-202ENST00000465601 RPL17P18621 184 aaKnown RBP13.39□□□□□ -0.27
CHPF2-202ENST00000465601 FGFR3P22607 806 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 TKTP29401 623 aaKnown RBP13.39□□□□□ -0.27
CHPF2-202ENST00000465601 MCM4P33991 863 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 ADAM9Q13443 819 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 PSMD6Q15008 389 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 CTC1Q2NKJ3 1217 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 COBLL1Q53SF7 1204 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 SCARA3Q6AZY7 606 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 CENPPQ6IPU0 288 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 LLGL2Q6P1M3 1020 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.39□□□□□ -0.27
CHPF2-202ENST00000465601 EFHBQ8N7U6 833 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 VN1R2Q8NFZ6 395 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 OR5B17Q8NGF7 314 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 PABPC5Q96DU9 382 aaKnown RBP13.39□□□□□ -0.27
CHPF2-202ENST00000465601 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 CDCA3Q99618 268 aaPredicted RBP13.39□□□□□ -0.27
CHPF2-202ENST00000465601 EMILIN2Q9BXX0 1053 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 MTMR12Q9C0I1 747 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 UBE2ZQ9H832 354 aaPredicted RBP13.39□□□□□ -0.27
CHPF2-202ENST00000465601 INTS13Q9NVM9 706 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 COG5Q9UP83 839 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 TTC28Q96AY4 2481 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 PTPRJQ12913 1337 aa13.39□□□□□ -0.27
CHPF2-202ENST00000465601 XIRP2A4UGR9 3374 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 PPP1R3GB7ZBB8 358 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 TEX28O15482 410 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 GLP2RO95838 553 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 TMEM191BP0C7N4 346 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 TNNI1P19237 187 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 KCNA5P22460 613 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 NR2F2P24468 414 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 RPL13P26373 211 aaKnown RBP13.38□□□□□ -0.27
CHPF2-202ENST00000465601 KLRC2P26717 231 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 LTBRP36941 435 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 PMS1P54277 932 aaKnown RBP13.38□□□□□ -0.27
CHPF2-202ENST00000465601 LILRA4P59901 499 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 TFF2Q03403 129 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 DLX2Q07687 328 aaPredicted RBP13.38□□□□□ -0.27
CHPF2-202ENST00000465601 STIM1Q13586 685 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 COL19A1Q14993 1142 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 NFIL3Q16649 462 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 DUOXA2Q1HG44 320 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 ZCWPW2Q504Y3 356 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 ANKRD40Q6AI12 368 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 KLHL10Q6JEL2 608 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 DSTYKQ6XUX3 929 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 GLYCTKQ8IVS8 523 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 CSGALNACT2Q8N6G5 542 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 C1orf127Q8N9H9 656 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 LNX1Q8TBB1 728 aaPredicted RBP13.38□□□□□ -0.27
CHPF2-202ENST00000465601 PLEKHO2Q8TD55 490 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 EEF2KMTQ96G04 330 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 ANKRD36BP1Q96IX9 119 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 SUSD3Q96L08 255 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 NUP62CLQ9H1M0 184 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 RXFP1Q9HBX9 757 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 THEGQ9P2T0 379 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 AGAP1Q9UPQ3 857 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 FRMD4BQ9Y2L6 1034 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 DOCK6Q96HP0 2047 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
CHPF2-202ENST00000465601 TRIM49BA6NDI0 452 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
CHPF2-202ENST00000465601 PSMA7O14818 248 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 SPTLC1O15269 473 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 TNNC2P02585 160 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 ITGB3P05106 788 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 KRT19P08727 400 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 EPCAMP16422 314 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 CCNE1P24864 410 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 POLR2BP30876 1174 aaKnown RBP13.37□□□□□ -0.27
CHPF2-202ENST00000465601 NDUFV1P49821 464 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 KCNC3Q14003 757 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 PSMD5Q16401 504 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 EDRF1Q3B7T1 1238 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 WDR49Q8IV35 697 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 GPR65Q8IYL9 337 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 PARD3BQ8TEW8 1205 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 SLC22A17Q8WUG5 538 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 PIK3R5Q8WYR1 880 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 DHTKD1Q96HY7 919 aaPredicted RBP13.37□□□□□ -0.27
CHPF2-202ENST00000465601 SENP8Q96LD8 212 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 CGRRF1Q99675 332 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 TSG101Q99816 390 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 GZF1Q9H116 711 aaPredicted RBP13.37□□□□□ -0.27
CHPF2-202ENST00000465601 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHPF2-202ENST00000465601 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 SIX4Q9UIU6 781 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 BARX2Q9UMQ3 279 aaPredicted RBP13.37□□□□□ -0.27
CHPF2-202ENST00000465601 TIMM13Q9Y5L4 95 aaPredicted RBP13.37□□□□□ -0.27
CHPF2-202ENST00000465601 HCFC2Q9Y5Z7 792 aa13.37□□□□□ -0.27
CHPF2-202ENST00000465601 C5orf42Q9H799 3197 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms