RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 PAXBP1Q9Y5B6 917 aa4.56□□□□□ -1.68
HMGXB4-205ENST00000464480 SNX13Q9Y5W8 968 aa4.56□□□□□ -1.68
HMGXB4-205ENST00000464480 COMMD10Q9Y6G5 202 aa4.56□□□□□ -1.68
HMGXB4-205ENST00000464480 CDHR4A6H8M9 788 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 RHPN2P1A8MT19 583 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 CAPN14A8MX76 684 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 GPR42O15529 346 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 FOXS1O43638 330 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 MATN4O95460 622 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 GJB1P08034 283 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 RARBP10826 455 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 SLC5A1P13866 664 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 NPR1P16066 1061 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 COMTP21964 271 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 EXOSC9Q06265 439 aaKnown RBP4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 KIF22Q14807 665 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 VPS72Q15906 364 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 HS1BP3Q53T59 392 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 ZNF783Q6ZMS7 281 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 FITM2Q8N6M3 262 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 RNF169Q8NCN4 708 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 OR10H5Q8NGA6 315 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 PARD3BQ8TEW8 1205 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 KBTBD7Q8WVZ9 684 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 DDX17Q92841 729 aaKnown RBP4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 PMM1Q92871 262 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 GJA10Q969M2 543 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 FAM89AQ96GI7 184 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 MRGPRX1Q96LB2 322 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 MYD88Q99836 296 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 NAA15Q9BXJ9 866 aaKnown RBP4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 CPEB1Q9BZB8 566 aaKnown RBP4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 REXO4Q9GZR2 422 aaKnown RBP4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 SIK2Q9H0K1 926 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 RSAD1Q9HA92 442 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 ZNF287Q9HBT7 754 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 NLRC4Q9NPP4 1024 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 FBXO34Q9NWN3 711 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
HMGXB4-205ENST00000464480 ADAMTS20P59510 1910 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 ARID4BQ4LE39 1312 aaPredicted RBP4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 PNPLA7Q6ZV29 1317 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 ZNF785A8K8V0 405 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 MYO1FO00160 1098 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 TBX3O15119 743 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 PRICKLE3O43900 615 aaPredicted RBP4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 CHEK2O96017 543 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 ITGB1P05556 798 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 HK1P19367 917 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 EN2P19622 333 aaPredicted RBP4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 TM4SF4P48230 202 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 PSMC1P62191 440 aaKnown RBP4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 NOMO3P69849 1222 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 CNGA2Q16280 664 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 SLC44A4Q53GD3 710 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 LIMS2Q7Z4I7 341 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 SGMS1Q86VZ5 419 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 GSPT2Q8IYD1 628 aaKnown RBP4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 FAM186BQ8IYM0 893 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 CELF5Q8N6W0 485 aaKnown RBP4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 OR6B3Q8NGW1 331 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 TBC1D15Q8TC07 691 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 ATXN2LQ8WWM7 1075 aaKnown RBP4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 PHKBQ93100 1093 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 PGBD4Q96DM1 585 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 SLC39A13Q96H72 371 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 TRIM54Q9BYV2 358 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 GSTO2Q9H4Y5 243 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 PNPLA8Q9NP80 782 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 CORO2BQ9UQ03 480 aa4.54□□□□□ -1.68
HMGXB4-205ENST00000464480 GOLGA6L6A8MZA4 724 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 PATE3B3GLJ2 98 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 AGFG2O95081 481 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 HDCP19113 662 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 SLC6A4P31645 630 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 HTR3AP46098 478 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 SUMO3P55854 103 aaPredicted RBP4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 MXRA7P84157 204 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 UTP14CQ5TAP6 766 aaKnown RBP4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 TTLL10Q6ZVT0 673 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 MED25Q71SY5 747 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 SRLQ86TD4 932 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 MORC1Q86VD1 984 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 PCSK9Q8NBP7 692 aaKnown RBP4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 ACRBPQ8NEB7 543 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 SCAMP4Q969E2 229 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 TBCBQ99426 244 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 P2RX7Q99572 595 aaKnown RBP4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 UNKQ9C0B0 810 aaKnown RBP4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 GPR35Q9HC97 309 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 SRRDQ9UH36 339 aa4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 AFF4Q9UHB7 1163 aaKnown RBP4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGXB4-205ENST00000464480 USP19O94966 1318 aa4.52□□□□□ -1.69
HMGXB4-205ENST00000464480 DRGXA6NNA5 263 aa4.52□□□□□ -1.69
HMGXB4-205ENST00000464480 RASA4BC9J798 803 aa4.52□□□□□ -1.69
HMGXB4-205ENST00000464480 RASA4O43374 803 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms