RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FAXDC2Q96IV6 333 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 PPP1R9BQ96SB3 815 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 LBHD1Q9BQE6 289 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-202ENST00000463060 PI4K2AQ9BTU6 479 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 NUP58Q9BVL2 599 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 LSM14BQ9BX40 385 aaKnown RBP15.45■□□□□ 0.06
COL6A1-202ENST00000463060 EDEM3Q9BZQ6 932 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 GOLGA2P5Q9HBQ8 144 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 FAM207AQ9NSI2 230 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-202ENST00000463060 CAPN11Q9UMQ6 739 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 AGAP1Q9UPQ3 857 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 INPP5FQ9Y2H2 1132 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 NUB1Q9Y5A7 615 aa15.45■□□□□ 0.06
COL6A1-202ENST00000463060 TDRD15B5MCY1 1934 aaKnown RBP15.45■□□□□ 0.06
COL6A1-202ENST00000463060 SCN1AP35498 2009 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 A0A1W2PQJ5 194 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 UCHL3P15374 230 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 POLR2BP30876 1174 aaKnown RBP15.44■□□□□ 0.06
COL6A1-202ENST00000463060 PIK3CAP42336 1068 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 HTRA4P83105 476 aaPredicted RBP15.44■□□□□ 0.06
COL6A1-202ENST00000463060 ARID5BQ14865 1188 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 UPP1Q16831 310 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 GJB7Q6PEY0 223 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 LIMS2Q7Z4I7 341 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 ARHGEF19Q8IW93 802 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 NEK11Q8NG66 645 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 URGCPQ8TCY9 931 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 BAP1Q92560 729 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 ELMO3Q96BJ8 720 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 IQCDQ96DY2 449 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 PAAF1Q9BRP4 392 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 NRDE2Q9H7Z3 1164 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 IMPACTQ9P2X3 320 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 APEX2Q9UBZ4 518 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 AJAP1Q9UKB5 411 aaPredicted RBP15.44■□□□□ 0.06
COL6A1-202ENST00000463060 DAAM1Q9Y4D1 1078 aa15.44■□□□□ 0.06
COL6A1-202ENST00000463060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL6A1-202ENST00000463060 SPTLC1O15269 473 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 UPP2O95045 317 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 MAGEA10P43363 369 aaPredicted RBP15.43■□□□□ 0.06
COL6A1-202ENST00000463060 KCNJ6P48051 423 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 FXR1P51114 621 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL6A1-202ENST00000463060 CLCNKBP51801 687 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 GCNT1Q02742 428 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 TRPC3Q13507 836 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 IQCEQ6IPM2 695 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 SPOPLQ6IQ16 392 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 TMCO2Q7Z6W1 182 aaPredicted RBP15.43■□□□□ 0.06
COL6A1-202ENST00000463060 PHOSPHO2Q8TCD6 241 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 DDX27Q96GQ7 796 aaKnown RBP15.43■□□□□ 0.06
COL6A1-202ENST00000463060 HPDLQ96IR7 371 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 KREMEN1Q96MU8 473 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 UROC1Q96N76 676 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 GDF15Q99988 308 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 CWH43Q9H720 699 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 CEP72Q9P209 647 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 CACNG4Q9UBN1 327 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 FHOD1Q9Y613 1164 aa15.43■□□□□ 0.06
COL6A1-202ENST00000463060 TBKBP1A7MCY6 615 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 GJB5O95377 273 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 KRT19P08727 400 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 AARSP49588 968 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL6A1-202ENST00000463060 LILRA4P59901 499 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 NOP14P78316 857 aaKnown RBP15.42■□□□□ 0.06
COL6A1-202ENST00000463060 LRMPQ12912 555 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 TRIM14Q14142 442 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 ZNF699Q32M78 642 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 WDR44Q5JSH3 913 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 SMYD5Q6GMV2 418 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 DCLRE1AQ6PJP8 1040 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 ABI1Q8IZP0 508 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 UBR7Q8N806 425 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 C3orf58Q8NDZ4 430 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 ANP32BQ92688 251 aaKnown RBP15.42■□□□□ 0.06
COL6A1-202ENST00000463060 KAT5Q92993 513 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 JAKMIP2Q96AA8 810 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 PCMTD1Q96MG8 357 aaPredicted RBP15.42■□□□□ 0.06
COL6A1-202ENST00000463060 NT5C1BQ96P26 610 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 MRPL9Q9BYD2 267 aaKnown RBP15.42■□□□□ 0.06
COL6A1-202ENST00000463060 STK33Q9BYT3 514 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 BCO2Q9BYV7 579 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 GPR88Q9GZN0 384 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 GDAP2Q9NXN4 497 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 DNAJB4Q9UDY4 337 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 DNAJC12Q9UKB3 198 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 PDE4DIPQ5VU43 2346 aa15.42■□□□□ 0.06
COL6A1-202ENST00000463060 CASTOR2A6NHX0 329 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 ZBBXA8MT70 800 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 TMEM189-UBE2V1I3L0A0 370 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 PODXLO00592 558 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 TRIM21P19474 475 aaKnown RBP15.41■□□□□ 0.06
COL6A1-202ENST00000463060 RFX1P22670 979 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 CASP14P31944 242 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 PNPLA4P41247 253 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 ASPAP45381 313 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 JAM2P57087 298 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 POLR2FP61218 127 aaKnown RBP15.41■□□□□ 0.06
COL6A1-202ENST00000463060 C9orf50Q5SZB4 431 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 RRAGAQ7L523 313 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 CMTR2Q8IYT2 770 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms