RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 NMT1P30419 496 aaKnown RBP7.92□□□□□ -1.14
PTPRF-210ENST00000463041 MCM4P33991 863 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 TNFSF9P41273 254 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 ROR1Q01973 937 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 CEBPZQ03701 1054 aaKnown RBP7.92□□□□□ -1.14
PTPRF-210ENST00000463041 PPP2R3AQ06190 1150 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 ENOX2Q16206 610 aaKnown RBP7.92□□□□□ -1.14
PTPRF-210ENST00000463041 CTXN3Q4LDR2 81 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 SPATA1Q5VX52 437 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 ADALQ6DHV7 355 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 DYMQ7RTS9 669 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 MAP4K3Q8IVH8 894 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 TCEAL8Q8IYN2 117 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 BEST2Q8NFU1 509 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 SLC7A14Q8TBB6 771 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 DDX12PQ92771 950 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 HVCN1Q96D96 273 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 DNAJC19Q96DA6 116 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 ZNF396Q96N95 335 aaPredicted RBP7.92□□□□□ -1.14
PTPRF-210ENST00000463041 USP28Q96RU2 1077 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 RTP3Q9BQQ7 232 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 MSTO1Q9BUK6 570 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 SMOC2Q9H3U7 446 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 ASB7Q9H672 318 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 DNMT3BQ9UBC3 853 aaKnown RBP7.92□□□□□ -1.14
PTPRF-210ENST00000463041 FBXL5Q9UKA1 691 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 CPSF3Q9UKF6 684 aaKnown RBP7.92□□□□□ -1.14
PTPRF-210ENST00000463041 FBXL21Q9UKT6 434 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 AGO2Q9UKV8 859 aaKnown RBP7.92□□□□□ -1.14
PTPRF-210ENST00000463041 CDH7Q9ULB5 785 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 POLIQ9UNA4 740 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 EXOC7Q9UPT5 735 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 DERAQ9Y315 318 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 PCDHB13Q9Y5F0 798 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 CACNA1IQ9P0X4 2223 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 KMT2EQ8IZD2 1858 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 F5P12259 2224 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 WDR27A2RRH5 827 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 MYMKA6NI61 221 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ANKRD63C9JTQ0 380 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 PRRG1O14668 218 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ZNF197O14709 1029 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 GALR2O43603 387 aaPredicted RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 PPP6R2O75170 966 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 MICAL2O94851 1124 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 LRG1P02750 347 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 SRFP11831 508 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 NASPP49321 788 aaPredicted RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 AARSP49588 968 aaKnown RBP eCLIP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 VCPP55072 806 aaKnown RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ARPP19P56211 112 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 LILRA4P59901 499 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 NTHL1P78549 312 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 YWHAHQ04917 246 aaPredicted RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 SPAG1Q07617 926 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 TCF15Q12870 199 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 HTR4Q13639 388 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ALCAMQ13740 583 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 STK38Q15208 465 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 PABPC1LQ4VXU2 614 aaKnown RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ZC2HC1CQ53FD0 456 aaPredicted RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ZNF280DQ6N043 979 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 SLC39A4Q6P5W5 647 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 DSTYKQ6XUX3 929 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 MTSS1LQ765P7 747 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 GET4Q7L5D6 327 aaPredicted RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 USP37Q86T82 979 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ALYREFQ86V81 257 aaKnown RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 LINC00301Q8NCQ3 95 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 PRSS33Q8NF86 280 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 RSAD2Q8WXG1 361 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 FGF13Q92913 245 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 FAM212AQ96EL1 285 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ZNF512Q96ME7 567 aaPredicted RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ACCSQ96QU6 501 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 STRA6Q9BX79 667 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 PANK2Q9BZ23 570 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 LRRC27Q9C0I9 530 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 MRPL44Q9H9J2 332 aaKnown RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 CYP4F11Q9HBI6 524 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 FOXD4L1Q9NU39 408 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 GDE1Q9NZC3 331 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 TFIP11Q9UBB9 837 aaKnown RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 TUBGCP4Q9UGJ1 667 aa7.91□□□□□ -1.14
PTPRF-210ENST00000463041 AFF4Q9UHB7 1163 aaKnown RBP7.91□□□□□ -1.14
PTPRF-210ENST00000463041 ZFHX2Q9C0A1 2572 aaPredicted RBP7.9□□□□□ -1.14
PTPRF-210ENST00000463041 TCHHQ07283 1943 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 MYH15Q9Y2K3 1946 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 ANO9A1A5B4 782 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 OR6C75A6NL08 312 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 STK25O00506 426 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 PIRO00625 290 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 SPTLC2O15270 562 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 NARSO43776 548 aaKnown RBP7.9□□□□□ -1.14
PTPRF-210ENST00000463041 PPP1R37O75864 691 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 SEC24AO95486 1093 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 YEATS4O95619 227 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 LDHAP00338 332 aaKnown RBP7.9□□□□□ -1.14
PTPRF-210ENST00000463041 RHOP08100 348 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 NPR3P17342 541 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms